Protein–RNA interactions for Protein: P01867

Igh-3, Ig gamma-2B chain C region, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-3P01867 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.47■■□□□ 1.03
Igh-3P01867 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Igh-3P01867 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Igh-3P01867 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.46■■□□□ 1.03
Igh-3P01867 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Igh-3P01867 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.45■■□□□ 1.03
Igh-3P01867 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igh-3P01867 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igh-3P01867 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igh-3P01867 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Igh-3P01867 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Igh-3P01867 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Igh-3P01867 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
Igh-3P01867 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igh-3P01867 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igh-3P01867 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Igh-3P01867 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.42■■□□□ 1.02
Igh-3P01867 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Igh-3P01867 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC21.41■■□□□ 1.02
Igh-3P01867 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Igh-3P01867 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Igh-3P01867 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Igh-3P01867 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igh-3P01867 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igh-3P01867 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Igh-3P01867 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Igh-3P01867 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Igh-3P01867 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Igh-3P01867 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igh-3P01867 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igh-3P01867 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Igh-3P01867 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igh-3P01867 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Igh-3P01867 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Igh-3P01867 Amer2-203ENSMUST00000225247 2662 ntBASIC21.35■■□□□ 1.01
Igh-3P01867 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Igh-3P01867 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Igh-3P01867 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.33■■□□□ 1.01
Igh-3P01867 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Igh-3P01867 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.32■■□□□ 1
Igh-3P01867 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Igh-3P01867 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Igh-3P01867 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.3■■□□□ 1
Igh-3P01867 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Igh-3P01867 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Igh-3P01867 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igh-3P01867 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igh-3P01867 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igh-3P01867 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Igh-3P01867 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Igh-3P01867 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Igh-3P01867 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.27■■□□□ 1
Igh-3P01867 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Igh-3P01867 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Igh-3P01867 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Igh-3P01867 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Igh-3P01867 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Igh-3P01867 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.25■□□□□ 0.99
Igh-3P01867 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Igh-3P01867 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igh-3P01867 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Igh-3P01867 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Igh-3P01867 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Igh-3P01867 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igh-3P01867 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igh-3P01867 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Igh-3P01867 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igh-3P01867 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Igh-3P01867 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.21■□□□□ 0.99
Igh-3P01867 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Igh-3P01867 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
Igh-3P01867 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
Igh-3P01867 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Igh-3P01867 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Igh-3P01867 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Igh-3P01867 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igh-3P01867 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.19■□□□□ 0.98
Igh-3P01867 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Igh-3P01867 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Igh-3P01867 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.17■□□□□ 0.98
Igh-3P01867 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Igh-3P01867 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.16■□□□□ 0.98
Igh-3P01867 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Igh-3P01867 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Igh-3P01867 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igh-3P01867 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Igh-3P01867 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Igh-3P01867 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Igh-3P01867 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Igh-3P01867 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.11■□□□□ 0.97
Igh-3P01867 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igh-3P01867 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Igh-3P01867 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Igh-3P01867 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.1■□□□□ 0.97
Igh-3P01867 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Igh-3P01867 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.09■□□□□ 0.97
Igh-3P01867 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Igh-3P01867 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.08■□□□□ 0.97
Igh-3P01867 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Igh-3P01867 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms