Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01788 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01788 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P01788 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
P01788 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01788 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01788 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P01788 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
P01788 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
P01788 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01788 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01788 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
P01788 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
P01788 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
P01788 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01788 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01788 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
P01788 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
P01788 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
P01788 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
P01788 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01788 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01788 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.07■□□□□ 0.64
P01788 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
P01788 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
P01788 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
P01788 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
P01788 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
P01788 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01788 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01788 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
P01788 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
P01788 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.03■□□□□ 0.64
P01788 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01788 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
P01788 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.02■□□□□ 0.64
P01788 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
P01788 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.02■□□□□ 0.63
P01788 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
P01788 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
P01788 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P01788 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01788 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01788 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.01■□□□□ 0.63
P01788 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
P01788 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19■□□□□ 0.63
P01788 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
P01788 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19■□□□□ 0.63
P01788 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19■□□□□ 0.63
P01788 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
P01788 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
P01788 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01788 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01788 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC18.99■□□□□ 0.63
P01788 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01788 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01788 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P01788 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P01788 Gm24804-201ENSMUST00000174982 85 ntBASIC18.97■□□□□ 0.63
P01788 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
P01788 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
P01788 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
P01788 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P01788 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01788 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P01788 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01788 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
P01788 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P01788 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01788 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.94■□□□□ 0.62
P01788 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P01788 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01788 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01788 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01788 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
P01788 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01788 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
P01788 Gm16148-201ENSMUST00000119653 893 ntBASIC18.91■□□□□ 0.62
P01788 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01788 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01788 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01788 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.89■□□□□ 0.61
P01788 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.88■□□□□ 0.61
P01788 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01788 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
P01788 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
P01788 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
P01788 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01788 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
P01788 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P01788 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P01788 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.86■□□□□ 0.61
P01788 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P01788 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
P01788 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01788 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01788 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P01788 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P01788 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
P01788 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms