Protein–RNA interactions for Protein: P01727

Ig lambda-1 chain V region S43, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01727 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
P01727 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.43■□□□□ 0.7
P01727 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
P01727 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
P01727 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
P01727 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
P01727 Gm6345-201ENSMUST00000180378 1691 ntBASIC19.4■□□□□ 0.7
P01727 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.4■□□□□ 0.7
P01727 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P01727 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
P01727 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.38■□□□□ 0.69
P01727 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
P01727 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01727 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
P01727 Gm11599-201ENSMUST00000118720 878 ntBASIC19.37■□□□□ 0.69
P01727 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
P01727 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.37■□□□□ 0.69
P01727 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01727 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P01727 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
P01727 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01727 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.36■□□□□ 0.69
P01727 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.36■□□□□ 0.69
P01727 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01727 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P01727 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P01727 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
P01727 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.35■□□□□ 0.69
P01727 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
P01727 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01727 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
P01727 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
P01727 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01727 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
P01727 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01727 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.32■□□□□ 0.68
P01727 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
P01727 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
P01727 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
P01727 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P01727 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.29■□□□□ 0.68
P01727 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01727 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P01727 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
P01727 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.28■□□□□ 0.68
P01727 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01727 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
P01727 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
P01727 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
P01727 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
P01727 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
P01727 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
P01727 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
P01727 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
P01727 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
P01727 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
P01727 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
P01727 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
P01727 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
P01727 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01727 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01727 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P01727 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.22■□□□□ 0.67
P01727 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
P01727 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
P01727 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
P01727 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.2■□□□□ 0.66
P01727 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.2■□□□□ 0.66
P01727 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
P01727 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P01727 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.18■□□□□ 0.66
P01727 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.17■□□□□ 0.66
P01727 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
P01727 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.17■□□□□ 0.66
P01727 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
P01727 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01727 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P01727 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
P01727 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.16■□□□□ 0.66
P01727 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01727 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
P01727 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
P01727 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.15■□□□□ 0.66
P01727 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01727 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
P01727 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.13■□□□□ 0.65
P01727 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
P01727 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC19.13■□□□□ 0.65
P01727 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
P01727 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
P01727 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P01727 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
P01727 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.12■□□□□ 0.65
P01727 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
P01727 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
P01727 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
P01727 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
P01727 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
P01727 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
P01727 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms