Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Apaf1O88879 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Apaf1O88879 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Apaf1O88879 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Apaf1O88879 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Apaf1O88879 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
Apaf1O88879 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
Apaf1O88879 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Apaf1O88879 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Apaf1O88879 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Apaf1O88879 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
Apaf1O88879 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Apaf1O88879 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Apaf1O88879 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Apaf1O88879 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Apaf1O88879 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
Apaf1O88879 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
Apaf1O88879 Gm9939-201ENSMUST00000067161 1154 ntBASIC32.09■■■□□ 2.73
Apaf1O88879 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC32.09■■■□□ 2.73
Apaf1O88879 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Apaf1O88879 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Apaf1O88879 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC32.07■■■□□ 2.72
Apaf1O88879 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
Apaf1O88879 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Apaf1O88879 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Apaf1O88879 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
Apaf1O88879 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
Apaf1O88879 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Apaf1O88879 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Apaf1O88879 Gm9905-201ENSMUST00000065740 1845 ntBASIC32.03■■■□□ 2.72
Apaf1O88879 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Apaf1O88879 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC32.01■■■□□ 2.71
Apaf1O88879 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
Apaf1O88879 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Apaf1O88879 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC32■■■□□ 2.71
Apaf1O88879 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Apaf1O88879 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Apaf1O88879 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Apaf1O88879 Gm42809-201ENSMUST00000198429 1138 ntBASIC31.99■■■□□ 2.71
Apaf1O88879 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Apaf1O88879 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Apaf1O88879 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.98■■■□□ 2.71
Apaf1O88879 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
Apaf1O88879 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Apaf1O88879 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
Apaf1O88879 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC31.97■■■□□ 2.71
Apaf1O88879 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC31.96■■■□□ 2.71
Apaf1O88879 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Apaf1O88879 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Apaf1O88879 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Apaf1O88879 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Apaf1O88879 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC31.94■■■□□ 2.7
Apaf1O88879 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Apaf1O88879 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Apaf1O88879 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC31.91■■■□□ 2.7
Apaf1O88879 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Apaf1O88879 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Apaf1O88879 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Apaf1O88879 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.69
Apaf1O88879 Amer2-203ENSMUST00000225247 2662 ntBASIC31.88■■■□□ 2.69
Apaf1O88879 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
Apaf1O88879 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Apaf1O88879 Gm6821-201ENSMUST00000107540 542 ntBASIC31.86■■■□□ 2.69
Apaf1O88879 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC31.86■■■□□ 2.69
Apaf1O88879 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Apaf1O88879 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Apaf1O88879 Nkain2-201ENSMUST00000092602 558 ntBASIC31.85■■■□□ 2.69
Apaf1O88879 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
Apaf1O88879 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.84■■■□□ 2.69
Apaf1O88879 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Apaf1O88879 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Apaf1O88879 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Apaf1O88879 Gm8503-201ENSMUST00000118131 455 ntBASIC31.82■■■□□ 2.68
Apaf1O88879 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.82■■■□□ 2.68
Apaf1O88879 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Apaf1O88879 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
Apaf1O88879 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Apaf1O88879 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Apaf1O88879 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.78■■■□□ 2.68
Apaf1O88879 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.78■■■□□ 2.68
Apaf1O88879 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Apaf1O88879 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
Apaf1O88879 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.75■■■□□ 2.67
Apaf1O88879 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC31.75■■■□□ 2.67
Apaf1O88879 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.75■■■□□ 2.67
Apaf1O88879 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Apaf1O88879 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Apaf1O88879 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Apaf1O88879 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
Apaf1O88879 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Apaf1O88879 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Apaf1O88879 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.69■■■□□ 2.66
Apaf1O88879 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Apaf1O88879 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Apaf1O88879 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Apaf1O88879 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Apaf1O88879 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Apaf1O88879 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
Apaf1O88879 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC31.65■■■□□ 2.66
Apaf1O88879 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms