Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Psmc3O88685 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Psmc3O88685 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Psmc3O88685 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.86■■□□□ 1.73
Psmc3O88685 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.86■■□□□ 1.73
Psmc3O88685 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.86■■□□□ 1.73
Psmc3O88685 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Psmc3O88685 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Psmc3O88685 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Psmc3O88685 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Psmc3O88685 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.81■■□□□ 1.72
Psmc3O88685 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.81■■□□□ 1.72
Psmc3O88685 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Psmc3O88685 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Psmc3O88685 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.8■■□□□ 1.72
Psmc3O88685 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Psmc3O88685 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.78■■□□□ 1.72
Psmc3O88685 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.78■■□□□ 1.72
Psmc3O88685 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
Psmc3O88685 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.77■■□□□ 1.72
Psmc3O88685 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Psmc3O88685 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Psmc3O88685 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Psmc3O88685 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.73■■□□□ 1.71
Psmc3O88685 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Psmc3O88685 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Psmc3O88685 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.72■■□□□ 1.71
Psmc3O88685 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.72■■□□□ 1.71
Psmc3O88685 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.71■■□□□ 1.71
Psmc3O88685 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Psmc3O88685 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Psmc3O88685 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.69■■□□□ 1.7
Psmc3O88685 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Psmc3O88685 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Psmc3O88685 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Psmc3O88685 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Psmc3O88685 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
Psmc3O88685 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Psmc3O88685 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Psmc3O88685 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Psmc3O88685 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Psmc3O88685 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.65■■□□□ 1.7
Psmc3O88685 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Psmc3O88685 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Psmc3O88685 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Psmc3O88685 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC25.63■■□□□ 1.69
Psmc3O88685 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Psmc3O88685 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Psmc3O88685 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.62■■□□□ 1.69
Psmc3O88685 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.62■■□□□ 1.69
Psmc3O88685 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Psmc3O88685 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
Psmc3O88685 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC25.59■■□□□ 1.69
Psmc3O88685 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Psmc3O88685 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
Psmc3O88685 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC25.58■■□□□ 1.69
Psmc3O88685 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Psmc3O88685 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
Psmc3O88685 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Psmc3O88685 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Psmc3O88685 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
Psmc3O88685 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Psmc3O88685 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.55■■□□□ 1.68
Psmc3O88685 Gm11175-201ENSMUST00000116172 543 ntBASIC25.55■■□□□ 1.68
Psmc3O88685 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
Psmc3O88685 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Psmc3O88685 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Psmc3O88685 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Psmc3O88685 Mir6538-201ENSMUST00000183713 110 ntBASIC25.54■■□□□ 1.68
Psmc3O88685 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Psmc3O88685 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Psmc3O88685 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Psmc3O88685 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Psmc3O88685 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Psmc3O88685 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
Psmc3O88685 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Psmc3O88685 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.51■■□□□ 1.67
Psmc3O88685 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Psmc3O88685 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Psmc3O88685 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
Psmc3O88685 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Psmc3O88685 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Psmc3O88685 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.48■■□□□ 1.67
Psmc3O88685 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Psmc3O88685 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.46■■□□□ 1.67
Psmc3O88685 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
Psmc3O88685 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Psmc3O88685 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Psmc3O88685 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Psmc3O88685 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Psmc3O88685 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Psmc3O88685 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Psmc3O88685 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Psmc3O88685 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Psmc3O88685 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
Psmc3O88685 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Psmc3O88685 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Psmc3O88685 Gm6311-201ENSMUST00000073790 878 ntBASIC25.4■■□□□ 1.66
Psmc3O88685 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Psmc3O88685 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.39■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms