Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Raet1cO08604 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Raet1cO08604 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.69■■□□□ 1.06
Raet1cO08604 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.69■■□□□ 1.06
Raet1cO08604 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Raet1cO08604 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1cO08604 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.68■■□□□ 1.06
Raet1cO08604 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1cO08604 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1cO08604 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1cO08604 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1cO08604 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Raet1cO08604 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Raet1cO08604 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Raet1cO08604 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Raet1cO08604 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Raet1cO08604 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
Raet1cO08604 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.65■■□□□ 1.06
Raet1cO08604 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Raet1cO08604 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.64■■□□□ 1.05
Raet1cO08604 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Raet1cO08604 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Raet1cO08604 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Raet1cO08604 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.63■■□□□ 1.05
Raet1cO08604 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Raet1cO08604 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Raet1cO08604 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.61■■□□□ 1.05
Raet1cO08604 Gm24970-201ENSMUST00000175582 82 ntBASIC21.61■■□□□ 1.05
Raet1cO08604 Gm45855-201ENSMUST00000212546 880 ntBASIC21.61■■□□□ 1.05
Raet1cO08604 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Raet1cO08604 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Raet1cO08604 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Raet1cO08604 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.6■■□□□ 1.05
Raet1cO08604 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Raet1cO08604 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Raet1cO08604 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Raet1cO08604 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.59■■□□□ 1.05
Raet1cO08604 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Raet1cO08604 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Raet1cO08604 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Raet1cO08604 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Raet1cO08604 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.56■■□□□ 1.04
Raet1cO08604 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Raet1cO08604 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Raet1cO08604 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Raet1cO08604 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.55■■□□□ 1.04
Raet1cO08604 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Raet1cO08604 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Raet1cO08604 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Raet1cO08604 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Raet1cO08604 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Raet1cO08604 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.5■■□□□ 1.03
Raet1cO08604 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Raet1cO08604 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Raet1cO08604 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Raet1cO08604 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Raet1cO08604 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Raet1cO08604 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Raet1cO08604 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Raet1cO08604 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Raet1cO08604 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Raet1cO08604 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.45■■□□□ 1.02
Raet1cO08604 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.45■■□□□ 1.02
Raet1cO08604 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
Raet1cO08604 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Raet1cO08604 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Raet1cO08604 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Raet1cO08604 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.44■■□□□ 1.02
Raet1cO08604 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Raet1cO08604 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Raet1cO08604 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Raet1cO08604 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Raet1cO08604 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Raet1cO08604 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Raet1cO08604 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Raet1cO08604 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Raet1cO08604 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Raet1cO08604 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Raet1cO08604 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Raet1cO08604 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.4■■□□□ 1.02
Raet1cO08604 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Raet1cO08604 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Raet1cO08604 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Raet1cO08604 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.38■■□□□ 1.01
Raet1cO08604 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Raet1cO08604 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Raet1cO08604 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Raet1cO08604 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Raet1cO08604 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Raet1cO08604 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Raet1cO08604 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Raet1cO08604 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Raet1cO08604 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Raet1cO08604 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.34■■□□□ 1.01
Raet1cO08604 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Raet1cO08604 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Raet1cO08604 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Raet1cO08604 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Raet1cO08604 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.32■■□□□ 1
Raet1cO08604 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms