Protein–RNA interactions for Protein: J3QPR6

Rfpl4b, MCG1377, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfpl4bJ3QPR6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Rfpl4bJ3QPR6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC28.49■■■□□ 2.15
Rfpl4bJ3QPR6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Rfpl4bJ3QPR6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.47■■■□□ 2.15
Rfpl4bJ3QPR6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Rfpl4bJ3QPR6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC28.46■■■□□ 2.15
Rfpl4bJ3QPR6 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Rfpl4bJ3QPR6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Rfpl4bJ3QPR6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Rfpl4bJ3QPR6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC28.43■■■□□ 2.14
Rfpl4bJ3QPR6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rfpl4bJ3QPR6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Rfpl4bJ3QPR6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rfpl4bJ3QPR6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Rfpl4bJ3QPR6 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Rfpl4bJ3QPR6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC28.41■■■□□ 2.14
Rfpl4bJ3QPR6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Rfpl4bJ3QPR6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Rfpl4bJ3QPR6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Rfpl4bJ3QPR6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Rfpl4bJ3QPR6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Rfpl4bJ3QPR6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rfpl4bJ3QPR6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rfpl4bJ3QPR6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.38■■■□□ 2.13
Rfpl4bJ3QPR6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC28.37■■■□□ 2.13
Rfpl4bJ3QPR6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
Rfpl4bJ3QPR6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC28.37■■■□□ 2.13
Rfpl4bJ3QPR6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.37■■■□□ 2.13
Rfpl4bJ3QPR6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Rfpl4bJ3QPR6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.36■■■□□ 2.13
Rfpl4bJ3QPR6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Rfpl4bJ3QPR6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC28.35■■■□□ 2.13
Rfpl4bJ3QPR6 Mir6538-201ENSMUST00000183713 110 ntBASIC28.35■■■□□ 2.13
Rfpl4bJ3QPR6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.35■■■□□ 2.13
Rfpl4bJ3QPR6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.34■■■□□ 2.13
Rfpl4bJ3QPR6 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Rfpl4bJ3QPR6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.33■■■□□ 2.13
Rfpl4bJ3QPR6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rfpl4bJ3QPR6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.31■■■□□ 2.12
Rfpl4bJ3QPR6 Gm11175-201ENSMUST00000116172 543 ntBASIC28.31■■■□□ 2.12
Rfpl4bJ3QPR6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
Rfpl4bJ3QPR6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rfpl4bJ3QPR6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Rfpl4bJ3QPR6 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.3■■■□□ 2.12
Rfpl4bJ3QPR6 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.3■■■□□ 2.12
Rfpl4bJ3QPR6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Rfpl4bJ3QPR6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Rfpl4bJ3QPR6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Rfpl4bJ3QPR6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Rfpl4bJ3QPR6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Rfpl4bJ3QPR6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Rfpl4bJ3QPR6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.26■■■□□ 2.11
Rfpl4bJ3QPR6 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
Rfpl4bJ3QPR6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Rfpl4bJ3QPR6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rfpl4bJ3QPR6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Rfpl4bJ3QPR6 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rfpl4bJ3QPR6 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rfpl4bJ3QPR6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Rfpl4bJ3QPR6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Rfpl4bJ3QPR6 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rfpl4bJ3QPR6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Rfpl4bJ3QPR6 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
Rfpl4bJ3QPR6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.18■■■□□ 2.1
Rfpl4bJ3QPR6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Rfpl4bJ3QPR6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rfpl4bJ3QPR6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rfpl4bJ3QPR6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.14■■■□□ 2.1
Rfpl4bJ3QPR6 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Rfpl4bJ3QPR6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Rfpl4bJ3QPR6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
Rfpl4bJ3QPR6 Cap2-205ENSMUST00000225824 1634 ntBASIC28.11■■■□□ 2.09
Rfpl4bJ3QPR6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rfpl4bJ3QPR6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.11■■■□□ 2.09
Rfpl4bJ3QPR6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Rfpl4bJ3QPR6 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Rfpl4bJ3QPR6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Rfpl4bJ3QPR6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Rfpl4bJ3QPR6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
Rfpl4bJ3QPR6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rfpl4bJ3QPR6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rfpl4bJ3QPR6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rfpl4bJ3QPR6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Rfpl4bJ3QPR6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.06■■■□□ 2.08
Rfpl4bJ3QPR6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rfpl4bJ3QPR6 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.06■■■□□ 2.08
Rfpl4bJ3QPR6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Rfpl4bJ3QPR6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Rfpl4bJ3QPR6 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Rfpl4bJ3QPR6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.04■■■□□ 2.08
Rfpl4bJ3QPR6 Gm6311-201ENSMUST00000073790 878 ntBASIC28.03■■■□□ 2.08
Rfpl4bJ3QPR6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Rfpl4bJ3QPR6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Rfpl4bJ3QPR6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rfpl4bJ3QPR6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Rfpl4bJ3QPR6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Rfpl4bJ3QPR6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Rfpl4bJ3QPR6 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
Rfpl4bJ3QPR6 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.98■■■□□ 2.07
Rfpl4bJ3QPR6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC27.98■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms