Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C530025M09RikF6RGA8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
C530025M09RikF6RGA8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C530025M09RikF6RGA8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C530025M09RikF6RGA8 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
C530025M09RikF6RGA8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C530025M09RikF6RGA8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C530025M09RikF6RGA8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
C530025M09RikF6RGA8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C530025M09RikF6RGA8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
C530025M09RikF6RGA8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
C530025M09RikF6RGA8 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.97■□□□□ 0.15
C530025M09RikF6RGA8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.96■□□□□ 0.15
C530025M09RikF6RGA8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
C530025M09RikF6RGA8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
C530025M09RikF6RGA8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
C530025M09RikF6RGA8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C530025M09RikF6RGA8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C530025M09RikF6RGA8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
C530025M09RikF6RGA8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.94■□□□□ 0.14
C530025M09RikF6RGA8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
C530025M09RikF6RGA8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
C530025M09RikF6RGA8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
C530025M09RikF6RGA8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
C530025M09RikF6RGA8 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
C530025M09RikF6RGA8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
C530025M09RikF6RGA8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
C530025M09RikF6RGA8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
C530025M09RikF6RGA8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
C530025M09RikF6RGA8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
C530025M09RikF6RGA8 Gm24804-201ENSMUST00000174982 85 ntBASIC15.9■□□□□ 0.14
C530025M09RikF6RGA8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
C530025M09RikF6RGA8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C530025M09RikF6RGA8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
C530025M09RikF6RGA8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
C530025M09RikF6RGA8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC15.87■□□□□ 0.13
C530025M09RikF6RGA8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
C530025M09RikF6RGA8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
C530025M09RikF6RGA8 Gm16148-201ENSMUST00000119653 893 ntBASIC15.85■□□□□ 0.13
C530025M09RikF6RGA8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
C530025M09RikF6RGA8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
C530025M09RikF6RGA8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
C530025M09RikF6RGA8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C530025M09RikF6RGA8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
C530025M09RikF6RGA8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
C530025M09RikF6RGA8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
C530025M09RikF6RGA8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
C530025M09RikF6RGA8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C530025M09RikF6RGA8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
C530025M09RikF6RGA8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C530025M09RikF6RGA8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
C530025M09RikF6RGA8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
C530025M09RikF6RGA8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
C530025M09RikF6RGA8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
C530025M09RikF6RGA8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
C530025M09RikF6RGA8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
C530025M09RikF6RGA8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
C530025M09RikF6RGA8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
C530025M09RikF6RGA8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
C530025M09RikF6RGA8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
C530025M09RikF6RGA8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
C530025M09RikF6RGA8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.76■□□□□ 0.11
C530025M09RikF6RGA8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
C530025M09RikF6RGA8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
C530025M09RikF6RGA8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
C530025M09RikF6RGA8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms