Protein–RNA interactions for Protein: E9PVD3

Dchs1, Protocadherin-16, mousemouse

Predictions only

Length 3,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dchs1E9PVD3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.09■■□□□ 1.13
Dchs1E9PVD3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Dchs1E9PVD3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Dchs1E9PVD3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Dchs1E9PVD3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Dchs1E9PVD3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Dchs1E9PVD3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Dchs1E9PVD3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Dchs1E9PVD3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.05■■□□□ 1.12
Dchs1E9PVD3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Dchs1E9PVD3 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.05■■□□□ 1.12
Dchs1E9PVD3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Dchs1E9PVD3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Dchs1E9PVD3 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.03■■□□□ 1.12
Dchs1E9PVD3 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Dchs1E9PVD3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Dchs1E9PVD3 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Dchs1E9PVD3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.02■■□□□ 1.12
Dchs1E9PVD3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Dchs1E9PVD3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Dchs1E9PVD3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Dchs1E9PVD3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.99■■□□□ 1.11
Dchs1E9PVD3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Dchs1E9PVD3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.98■■□□□ 1.11
Dchs1E9PVD3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Dchs1E9PVD3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.97■■□□□ 1.11
Dchs1E9PVD3 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Dchs1E9PVD3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Dchs1E9PVD3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Dchs1E9PVD3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Dchs1E9PVD3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.96■■□□□ 1.11
Dchs1E9PVD3 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Dchs1E9PVD3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Dchs1E9PVD3 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Dchs1E9PVD3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
Dchs1E9PVD3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.95■■□□□ 1.1
Dchs1E9PVD3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Dchs1E9PVD3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Dchs1E9PVD3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Dchs1E9PVD3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Dchs1E9PVD3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Dchs1E9PVD3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Dchs1E9PVD3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Dchs1E9PVD3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Dchs1E9PVD3 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Dchs1E9PVD3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Dchs1E9PVD3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Dchs1E9PVD3 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Dchs1E9PVD3 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Dchs1E9PVD3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Dchs1E9PVD3 Gm6311-201ENSMUST00000073790 878 ntBASIC21.91■■□□□ 1.1
Dchs1E9PVD3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Dchs1E9PVD3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Dchs1E9PVD3 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Dchs1E9PVD3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
Dchs1E9PVD3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.89■■□□□ 1.09
Dchs1E9PVD3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Dchs1E9PVD3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Dchs1E9PVD3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Dchs1E9PVD3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.88■■□□□ 1.09
Dchs1E9PVD3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Dchs1E9PVD3 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.87■■□□□ 1.09
Dchs1E9PVD3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Dchs1E9PVD3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.86■■□□□ 1.09
Dchs1E9PVD3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Dchs1E9PVD3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.86■■□□□ 1.09
Dchs1E9PVD3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Dchs1E9PVD3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.86■■□□□ 1.09
Dchs1E9PVD3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.86■■□□□ 1.09
Dchs1E9PVD3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
Dchs1E9PVD3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Dchs1E9PVD3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Dchs1E9PVD3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Dchs1E9PVD3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Dchs1E9PVD3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Dchs1E9PVD3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Dchs1E9PVD3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Dchs1E9PVD3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
Dchs1E9PVD3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Dchs1E9PVD3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Dchs1E9PVD3 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Dchs1E9PVD3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.82■■□□□ 1.08
Dchs1E9PVD3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Dchs1E9PVD3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Dchs1E9PVD3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Dchs1E9PVD3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Dchs1E9PVD3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.8■■□□□ 1.08
Dchs1E9PVD3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.79■■□□□ 1.08
Dchs1E9PVD3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Dchs1E9PVD3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Dchs1E9PVD3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Dchs1E9PVD3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Dchs1E9PVD3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dchs1E9PVD3 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Dchs1E9PVD3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Dchs1E9PVD3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.77■■□□□ 1.08
Dchs1E9PVD3 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Dchs1E9PVD3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Dchs1E9PVD3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Dchs1E9PVD3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms