Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BC035044E0CXF8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BC035044E0CXF8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BC035044E0CXF8 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BC035044E0CXF8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BC035044E0CXF8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BC035044E0CXF8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BC035044E0CXF8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BC035044E0CXF8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
BC035044E0CXF8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
BC035044E0CXF8 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BC035044E0CXF8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BC035044E0CXF8 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.78■□□□□ 0.92
BC035044E0CXF8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BC035044E0CXF8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
BC035044E0CXF8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
BC035044E0CXF8 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BC035044E0CXF8 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BC035044E0CXF8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.75■□□□□ 0.91
BC035044E0CXF8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.75■□□□□ 0.91
BC035044E0CXF8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BC035044E0CXF8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
BC035044E0CXF8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
BC035044E0CXF8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
BC035044E0CXF8 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BC035044E0CXF8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BC035044E0CXF8 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
BC035044E0CXF8 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BC035044E0CXF8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
BC035044E0CXF8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
BC035044E0CXF8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BC035044E0CXF8 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.72■□□□□ 0.91
BC035044E0CXF8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BC035044E0CXF8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
BC035044E0CXF8 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
BC035044E0CXF8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
BC035044E0CXF8 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
BC035044E0CXF8 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
BC035044E0CXF8 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BC035044E0CXF8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.69■□□□□ 0.9
BC035044E0CXF8 Gm24804-201ENSMUST00000174982 85 ntBASIC20.69■□□□□ 0.9
BC035044E0CXF8 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BC035044E0CXF8 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BC035044E0CXF8 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BC035044E0CXF8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
BC035044E0CXF8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.68■□□□□ 0.9
BC035044E0CXF8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
BC035044E0CXF8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BC035044E0CXF8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BC035044E0CXF8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BC035044E0CXF8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BC035044E0CXF8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BC035044E0CXF8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BC035044E0CXF8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BC035044E0CXF8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BC035044E0CXF8 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC20.63■□□□□ 0.89
BC035044E0CXF8 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BC035044E0CXF8 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BC035044E0CXF8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BC035044E0CXF8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BC035044E0CXF8 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BC035044E0CXF8 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BC035044E0CXF8 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BC035044E0CXF8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BC035044E0CXF8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
BC035044E0CXF8 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BC035044E0CXF8 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
BC035044E0CXF8 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.59■□□□□ 0.89
BC035044E0CXF8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
BC035044E0CXF8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BC035044E0CXF8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BC035044E0CXF8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.57■□□□□ 0.88
BC035044E0CXF8 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BC035044E0CXF8 Gm16148-201ENSMUST00000119653 893 ntBASIC20.57■□□□□ 0.88
BC035044E0CXF8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BC035044E0CXF8 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BC035044E0CXF8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BC035044E0CXF8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BC035044E0CXF8 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BC035044E0CXF8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BC035044E0CXF8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BC035044E0CXF8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BC035044E0CXF8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BC035044E0CXF8 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
BC035044E0CXF8 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BC035044E0CXF8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BC035044E0CXF8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BC035044E0CXF8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
BC035044E0CXF8 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
BC035044E0CXF8 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BC035044E0CXF8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BC035044E0CXF8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BC035044E0CXF8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.48■□□□□ 0.87
BC035044E0CXF8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
BC035044E0CXF8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BC035044E0CXF8 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
BC035044E0CXF8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.46■□□□□ 0.87
BC035044E0CXF8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BC035044E0CXF8 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
BC035044E0CXF8 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms