Protein–RNA interactions for Protein: B1AY40

Ssxb8, MCG1044712, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb8B1AY40 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ssxb8B1AY40 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ssxb8B1AY40 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ssxb8B1AY40 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ssxb8B1AY40 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ssxb8B1AY40 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Ssxb8B1AY40 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ssxb8B1AY40 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.44■■□□□ 1.34
Ssxb8B1AY40 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.43■■□□□ 1.34
Ssxb8B1AY40 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Ssxb8B1AY40 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.43■■□□□ 1.34
Ssxb8B1AY40 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ssxb8B1AY40 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ssxb8B1AY40 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ssxb8B1AY40 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ssxb8B1AY40 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ssxb8B1AY40 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Ssxb8B1AY40 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ssxb8B1AY40 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ssxb8B1AY40 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Ssxb8B1AY40 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Ssxb8B1AY40 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ssxb8B1AY40 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ssxb8B1AY40 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Ssxb8B1AY40 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.39■■□□□ 1.33
Ssxb8B1AY40 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ssxb8B1AY40 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ssxb8B1AY40 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ssxb8B1AY40 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.37■■□□□ 1.33
Ssxb8B1AY40 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.37■■□□□ 1.33
Ssxb8B1AY40 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ssxb8B1AY40 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ssxb8B1AY40 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ssxb8B1AY40 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ssxb8B1AY40 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ssxb8B1AY40 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ssxb8B1AY40 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Ssxb8B1AY40 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Ssxb8B1AY40 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Ssxb8B1AY40 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ssxb8B1AY40 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.34■■□□□ 1.33
Ssxb8B1AY40 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Ssxb8B1AY40 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Ssxb8B1AY40 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Ssxb8B1AY40 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Ssxb8B1AY40 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ssxb8B1AY40 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Ssxb8B1AY40 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ssxb8B1AY40 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ssxb8B1AY40 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ssxb8B1AY40 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ssxb8B1AY40 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
Ssxb8B1AY40 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.31■■□□□ 1.32
Ssxb8B1AY40 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ssxb8B1AY40 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.3■■□□□ 1.32
Ssxb8B1AY40 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ssxb8B1AY40 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ssxb8B1AY40 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ssxb8B1AY40 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ssxb8B1AY40 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ssxb8B1AY40 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC23.27■■□□□ 1.32
Ssxb8B1AY40 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ssxb8B1AY40 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ssxb8B1AY40 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ssxb8B1AY40 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ssxb8B1AY40 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ssxb8B1AY40 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ssxb8B1AY40 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ssxb8B1AY40 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ssxb8B1AY40 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Ssxb8B1AY40 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Ssxb8B1AY40 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ssxb8B1AY40 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Ssxb8B1AY40 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Ssxb8B1AY40 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Ssxb8B1AY40 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Ssxb8B1AY40 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Ssxb8B1AY40 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Ssxb8B1AY40 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ssxb8B1AY40 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ssxb8B1AY40 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC23.2■■□□□ 1.3
Ssxb8B1AY40 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
Ssxb8B1AY40 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ssxb8B1AY40 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ssxb8B1AY40 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.18■■□□□ 1.3
Ssxb8B1AY40 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Ssxb8B1AY40 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ssxb8B1AY40 Gm24804-201ENSMUST00000174982 85 ntBASIC23.16■■□□□ 1.3
Ssxb8B1AY40 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ssxb8B1AY40 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ssxb8B1AY40 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ssxb8B1AY40 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ssxb8B1AY40 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ssxb8B1AY40 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ssxb8B1AY40 Gm16148-201ENSMUST00000119653 893 ntBASIC23.13■■□□□ 1.29
Ssxb8B1AY40 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ssxb8B1AY40 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ssxb8B1AY40 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ssxb8B1AY40 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ssxb8B1AY40 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms