Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.24■□□□□ 0.99
Gm11127A7VMS2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm11127A7VMS2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11127A7VMS2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11127A7VMS2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11127A7VMS2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm11127A7VMS2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm11127A7VMS2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm11127A7VMS2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm11127A7VMS2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm11127A7VMS2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm11127A7VMS2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm11127A7VMS2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm11127A7VMS2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Gm11127A7VMS2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11127A7VMS2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11127A7VMS2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11127A7VMS2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm11127A7VMS2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.16■□□□□ 0.98
Gm11127A7VMS2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Gm11127A7VMS2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Gm11127A7VMS2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm11127A7VMS2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Gm11127A7VMS2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Gm11127A7VMS2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm11127A7VMS2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm11127A7VMS2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.14■□□□□ 0.98
Gm11127A7VMS2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm11127A7VMS2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm11127A7VMS2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm11127A7VMS2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.12■□□□□ 0.97
Gm11127A7VMS2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm11127A7VMS2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm11127A7VMS2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11127A7VMS2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11127A7VMS2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11127A7VMS2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11127A7VMS2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Gm11127A7VMS2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11127A7VMS2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11127A7VMS2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11127A7VMS2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11127A7VMS2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11127A7VMS2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11127A7VMS2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11127A7VMS2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11127A7VMS2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11127A7VMS2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Gm11127A7VMS2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.06■□□□□ 0.96
Gm11127A7VMS2 Gm16148-201ENSMUST00000119653 893 ntBASIC21.06■□□□□ 0.96
Gm11127A7VMS2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm11127A7VMS2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11127A7VMS2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Gm11127A7VMS2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11127A7VMS2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11127A7VMS2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11127A7VMS2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11127A7VMS2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11127A7VMS2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11127A7VMS2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11127A7VMS2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11127A7VMS2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11127A7VMS2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11127A7VMS2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11127A7VMS2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Gm11127A7VMS2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11127A7VMS2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11127A7VMS2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Gm11127A7VMS2 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.99■□□□□ 0.95
Gm11127A7VMS2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11127A7VMS2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11127A7VMS2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11127A7VMS2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.97■□□□□ 0.95
Gm11127A7VMS2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Gm11127A7VMS2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11127A7VMS2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11127A7VMS2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11127A7VMS2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11127A7VMS2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11127A7VMS2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11127A7VMS2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11127A7VMS2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11127A7VMS2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11127A7VMS2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm11127A7VMS2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm11127A7VMS2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm11127A7VMS2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm11127A7VMS2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gm11127A7VMS2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm11127A7VMS2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Gm11127A7VMS2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gm11127A7VMS2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm11127A7VMS2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms