Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.24■□□□□ 0.99
Gm11127A7VMS2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Gm11127A7VMS2 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11127A7VMS2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11127A7VMS2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Gm11127A7VMS2 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm11127A7VMS2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Gm11127A7VMS2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Gm11127A7VMS2 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Gm11127A7VMS2 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Gm11127A7VMS2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm11127A7VMS2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Gm11127A7VMS2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.18■□□□□ 0.98
Gm11127A7VMS2 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Gm11127A7VMS2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Gm11127A7VMS2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11127A7VMS2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11127A7VMS2 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Gm11127A7VMS2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm11127A7VMS2 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.16■□□□□ 0.98
Gm11127A7VMS2 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Gm11127A7VMS2 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Gm11127A7VMS2 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Gm11127A7VMS2 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Gm11127A7VMS2 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Gm11127A7VMS2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Gm11127A7VMS2 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Gm11127A7VMS2 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC21.14■□□□□ 0.98
Gm11127A7VMS2 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Gm11127A7VMS2 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm11127A7VMS2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Gm11127A7VMS2 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.12■□□□□ 0.97
Gm11127A7VMS2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Gm11127A7VMS2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Gm11127A7VMS2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11127A7VMS2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11127A7VMS2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11127A7VMS2 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Gm11127A7VMS2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Gm11127A7VMS2 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11127A7VMS2 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11127A7VMS2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11127A7VMS2 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Gm11127A7VMS2 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11127A7VMS2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11127A7VMS2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11127A7VMS2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Gm11127A7VMS2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Gm11127A7VMS2 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Gm11127A7VMS2 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.06■□□□□ 0.96
Gm11127A7VMS2 Gm16148-201ENSMUST00000119653 893 ntBASIC21.06■□□□□ 0.96
Gm11127A7VMS2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Gm11127A7VMS2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Gm11127A7VMS2 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Gm11127A7VMS2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11127A7VMS2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11127A7VMS2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Gm11127A7VMS2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11127A7VMS2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11127A7VMS2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Gm11127A7VMS2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11127A7VMS2 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11127A7VMS2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11127A7VMS2 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11127A7VMS2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Gm11127A7VMS2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Gm11127A7VMS2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11127A7VMS2 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Gm11127A7VMS2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Gm11127A7VMS2 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.99■□□□□ 0.95
Gm11127A7VMS2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11127A7VMS2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11127A7VMS2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Gm11127A7VMS2 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.97■□□□□ 0.95
Gm11127A7VMS2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Gm11127A7VMS2 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11127A7VMS2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11127A7VMS2 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11127A7VMS2 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11127A7VMS2 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Gm11127A7VMS2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11127A7VMS2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11127A7VMS2 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11127A7VMS2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Gm11127A7VMS2 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm11127A7VMS2 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Gm11127A7VMS2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Gm11127A7VMS2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Gm11127A7VMS2 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Gm11127A7VMS2 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Gm11127A7VMS2 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Gm11127A7VMS2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Gm11127A7VMS2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Gm11127A7VMS2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 165.1 ms