Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trav12-3A0A075B648 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.79■□□□□ 0.44
Trav12-3A0A075B648 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav12-3A0A075B648 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12-3A0A075B648 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav12-3A0A075B648 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12-3A0A075B648 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav12-3A0A075B648 Mipep-204ENSMUST00000225043 1548 ntBASIC17.77■□□□□ 0.43
Trav12-3A0A075B648 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav12-3A0A075B648 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-3A0A075B648 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-3A0A075B648 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav12-3A0A075B648 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Trav12-3A0A075B648 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-3A0A075B648 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.74■□□□□ 0.43
Trav12-3A0A075B648 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Trav12-3A0A075B648 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-3A0A075B648 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.74■□□□□ 0.43
Trav12-3A0A075B648 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav12-3A0A075B648 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Trav12-3A0A075B648 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12-3A0A075B648 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Trav12-3A0A075B648 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav12-3A0A075B648 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.69■□□□□ 0.42
Trav12-3A0A075B648 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-3A0A075B648 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-3A0A075B648 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-3A0A075B648 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Trav12-3A0A075B648 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-3A0A075B648 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav12-3A0A075B648 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12-3A0A075B648 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav12-3A0A075B648 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav12-3A0A075B648 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trav12-3A0A075B648 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-3A0A075B648 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-3A0A075B648 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-3A0A075B648 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-3A0A075B648 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav12-3A0A075B648 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12-3A0A075B648 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12-3A0A075B648 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12-3A0A075B648 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12-3A0A075B648 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav12-3A0A075B648 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12-3A0A075B648 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav12-3A0A075B648 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12-3A0A075B648 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav12-3A0A075B648 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-3A0A075B648 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-3A0A075B648 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav12-3A0A075B648 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-3A0A075B648 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trav12-3A0A075B648 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12-3A0A075B648 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12-3A0A075B648 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.64■□□□□ 0.41
Trav12-3A0A075B648 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav12-3A0A075B648 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12-3A0A075B648 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12-3A0A075B648 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12-3A0A075B648 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav12-3A0A075B648 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trav12-3A0A075B648 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12-3A0A075B648 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
Trav12-3A0A075B648 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trav12-3A0A075B648 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav12-3A0A075B648 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12-3A0A075B648 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trav12-3A0A075B648 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trav12-3A0A075B648 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12-3A0A075B648 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12-3A0A075B648 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trav12-3A0A075B648 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12-3A0A075B648 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.59■□□□□ 0.41
Trav12-3A0A075B648 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav12-3A0A075B648 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav12-3A0A075B648 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-3A0A075B648 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-3A0A075B648 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-3A0A075B648 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-3A0A075B648 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav12-3A0A075B648 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
Trav12-3A0A075B648 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-3A0A075B648 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-3A0A075B648 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-3A0A075B648 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-3A0A075B648 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav12-3A0A075B648 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-3A0A075B648 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-3A0A075B648 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav12-3A0A075B648 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav12-3A0A075B648 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-3A0A075B648 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-3A0A075B648 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav12-3A0A075B648 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Trav12-3A0A075B648 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-3A0A075B648 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav12-3A0A075B648 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Trav12-3A0A075B648 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav12-3A0A075B648 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms