Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trav6-7-dv9A0A075B639 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Trav6-7-dv9A0A075B639 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trav6-7-dv9A0A075B639 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.56■■□□□ 1.04
Trav6-7-dv9A0A075B639 Zfp131-205ENSMUST00000223812 663 ntBASIC21.56■■□□□ 1.04
Trav6-7-dv9A0A075B639 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Trav6-7-dv9A0A075B639 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav6-7-dv9A0A075B639 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.55■■□□□ 1.04
Trav6-7-dv9A0A075B639 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Trav6-7-dv9A0A075B639 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav6-7-dv9A0A075B639 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Trav6-7-dv9A0A075B639 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav6-7-dv9A0A075B639 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Trav6-7-dv9A0A075B639 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav6-7-dv9A0A075B639 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Trav6-7-dv9A0A075B639 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav6-7-dv9A0A075B639 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Trav6-7-dv9A0A075B639 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Trav6-7-dv9A0A075B639 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav6-7-dv9A0A075B639 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav6-7-dv9A0A075B639 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav6-7-dv9A0A075B639 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Trav6-7-dv9A0A075B639 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Trav6-7-dv9A0A075B639 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.48■■□□□ 1.03
Trav6-7-dv9A0A075B639 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Trav6-7-dv9A0A075B639 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.47■■□□□ 1.03
Trav6-7-dv9A0A075B639 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.47■■□□□ 1.03
Trav6-7-dv9A0A075B639 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.47■■□□□ 1.03
Trav6-7-dv9A0A075B639 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav6-7-dv9A0A075B639 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Trav6-7-dv9A0A075B639 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trav6-7-dv9A0A075B639 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Trav6-7-dv9A0A075B639 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.46■■□□□ 1.03
Trav6-7-dv9A0A075B639 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Trav6-7-dv9A0A075B639 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav6-7-dv9A0A075B639 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
Trav6-7-dv9A0A075B639 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav6-7-dv9A0A075B639 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.43■■□□□ 1.02
Trav6-7-dv9A0A075B639 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.43■■□□□ 1.02
Trav6-7-dv9A0A075B639 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav6-7-dv9A0A075B639 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav6-7-dv9A0A075B639 Gm9397-201ENSMUST00000200125 605 ntBASIC21.42■■□□□ 1.02
Trav6-7-dv9A0A075B639 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav6-7-dv9A0A075B639 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.41■■□□□ 1.02
Trav6-7-dv9A0A075B639 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Trav6-7-dv9A0A075B639 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trav6-7-dv9A0A075B639 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.4■■□□□ 1.02
Trav6-7-dv9A0A075B639 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav6-7-dv9A0A075B639 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav6-7-dv9A0A075B639 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trav6-7-dv9A0A075B639 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trav6-7-dv9A0A075B639 Gm24970-201ENSMUST00000175582 82 ntBASIC21.39■■□□□ 1.01
Trav6-7-dv9A0A075B639 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.39■■□□□ 1.01
Trav6-7-dv9A0A075B639 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.39■■□□□ 1.01
Trav6-7-dv9A0A075B639 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.38■■□□□ 1.01
Trav6-7-dv9A0A075B639 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav6-7-dv9A0A075B639 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trav6-7-dv9A0A075B639 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.37■■□□□ 1.01
Trav6-7-dv9A0A075B639 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trav6-7-dv9A0A075B639 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Trav6-7-dv9A0A075B639 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trav6-7-dv9A0A075B639 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav6-7-dv9A0A075B639 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trav6-7-dv9A0A075B639 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trav6-7-dv9A0A075B639 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Trav6-7-dv9A0A075B639 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trav6-7-dv9A0A075B639 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Trav6-7-dv9A0A075B639 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav6-7-dv9A0A075B639 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trav6-7-dv9A0A075B639 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.31■■□□□ 1
Trav6-7-dv9A0A075B639 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.31■■□□□ 1
Trav6-7-dv9A0A075B639 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Trav6-7-dv9A0A075B639 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav6-7-dv9A0A075B639 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trav6-7-dv9A0A075B639 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.29■■□□□ 1
Trav6-7-dv9A0A075B639 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav6-7-dv9A0A075B639 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trav6-7-dv9A0A075B639 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trav6-7-dv9A0A075B639 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.27■■□□□ 1
Trav6-7-dv9A0A075B639 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Trav6-7-dv9A0A075B639 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Trav6-7-dv9A0A075B639 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav6-7-dv9A0A075B639 Gm45855-201ENSMUST00000212546 880 ntBASIC21.26■□□□□ 0.99
Trav6-7-dv9A0A075B639 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav6-7-dv9A0A075B639 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.26■□□□□ 0.99
Trav6-7-dv9A0A075B639 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.25■□□□□ 0.99
Trav6-7-dv9A0A075B639 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trav6-7-dv9A0A075B639 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trav6-7-dv9A0A075B639 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Trav6-7-dv9A0A075B639 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav6-7-dv9A0A075B639 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC21.24■□□□□ 0.99
Trav6-7-dv9A0A075B639 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trav6-7-dv9A0A075B639 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav6-7-dv9A0A075B639 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trav6-7-dv9A0A075B639 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trav6-7-dv9A0A075B639 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav6-7-dv9A0A075B639 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Trav6-7-dv9A0A075B639 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trav6-7-dv9A0A075B639 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Trav6-7-dv9A0A075B639 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms