Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ighv1-55A0A075B5W6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-55A0A075B5W6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-55A0A075B5W6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-55A0A075B5W6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ighv1-55A0A075B5W6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-55A0A075B5W6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-55A0A075B5W6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ighv1-55A0A075B5W6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ighv1-55A0A075B5W6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.27■□□□□ 0.68
Ighv1-55A0A075B5W6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ighv1-55A0A075B5W6 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-55A0A075B5W6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-55A0A075B5W6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-55A0A075B5W6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ighv1-55A0A075B5W6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ighv1-55A0A075B5W6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19.24■□□□□ 0.67
Ighv1-55A0A075B5W6 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-55A0A075B5W6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ighv1-55A0A075B5W6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ighv1-55A0A075B5W6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ighv1-55A0A075B5W6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ighv1-55A0A075B5W6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Ighv1-55A0A075B5W6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-55A0A075B5W6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-55A0A075B5W6 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ighv1-55A0A075B5W6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-55A0A075B5W6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-55A0A075B5W6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-55A0A075B5W6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ighv1-55A0A075B5W6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.18■□□□□ 0.66
Ighv1-55A0A075B5W6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ighv1-55A0A075B5W6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-55A0A075B5W6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ighv1-55A0A075B5W6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.17■□□□□ 0.66
Ighv1-55A0A075B5W6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.16■□□□□ 0.66
Ighv1-55A0A075B5W6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ighv1-55A0A075B5W6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-55A0A075B5W6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ighv1-55A0A075B5W6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ighv1-55A0A075B5W6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-55A0A075B5W6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ighv1-55A0A075B5W6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.13■□□□□ 0.65
Ighv1-55A0A075B5W6 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.13■□□□□ 0.65
Ighv1-55A0A075B5W6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.12■□□□□ 0.65
Ighv1-55A0A075B5W6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ighv1-55A0A075B5W6 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.12■□□□□ 0.65
Ighv1-55A0A075B5W6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Ighv1-55A0A075B5W6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Ighv1-55A0A075B5W6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-55A0A075B5W6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ighv1-55A0A075B5W6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ighv1-55A0A075B5W6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ighv1-55A0A075B5W6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.1■□□□□ 0.65
Ighv1-55A0A075B5W6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ighv1-55A0A075B5W6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ighv1-55A0A075B5W6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Ighv1-55A0A075B5W6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.07■□□□□ 0.64
Ighv1-55A0A075B5W6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-55A0A075B5W6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-55A0A075B5W6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ighv1-55A0A075B5W6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-55A0A075B5W6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ighv1-55A0A075B5W6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ighv1-55A0A075B5W6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-55A0A075B5W6 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ighv1-55A0A075B5W6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-55A0A075B5W6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ighv1-55A0A075B5W6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-55A0A075B5W6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-55A0A075B5W6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ighv1-55A0A075B5W6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.03■□□□□ 0.64
Ighv1-55A0A075B5W6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-55A0A075B5W6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ighv1-55A0A075B5W6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ighv1-55A0A075B5W6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ighv1-55A0A075B5W6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ighv1-55A0A075B5W6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ighv1-55A0A075B5W6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Ighv1-55A0A075B5W6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-55A0A075B5W6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-55A0A075B5W6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-55A0A075B5W6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-55A0A075B5W6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ighv1-55A0A075B5W6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-55A0A075B5W6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-55A0A075B5W6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-55A0A075B5W6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ighv1-55A0A075B5W6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-55A0A075B5W6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-55A0A075B5W6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-55A0A075B5W6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ighv1-55A0A075B5W6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-55A0A075B5W6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-55A0A075B5W6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-55A0A075B5W6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Ighv1-55A0A075B5W6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Ighv1-55A0A075B5W6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-55A0A075B5W6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-55A0A075B5W6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms