Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 DLEU1-212ENST00000469754 2955 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
UBE4BO95155 AC136285.1-201ENST00000566092 1447 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 RGS17-201ENST00000206262 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
UBE4BO95155 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC9.69□□□□□ -0.86
UBE4BO95155 ZNF322-202ENST00000456172 4718 ntAPPRIS P1 TSL 3 BASIC9.69□□□□□ -0.86
UBE4BO95155 AL008721.2-201ENST00000609475 3754 ntBASIC9.69□□□□□ -0.86
UBE4BO95155 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC9.69□□□□□ -0.86
UBE4BO95155 SLAMF7-203ENST00000368043 2689 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 AC009502.1-201ENST00000607654 1965 ntBASIC9.69□□□□□ -0.86
UBE4BO95155 ZNF610-209ENST00000616431 1772 ntAPPRIS P3 TSL 2 BASIC9.69□□□□□ -0.86
UBE4BO95155 VNN3-212ENST00000519686 1377 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 ZNF468-201ENST00000243639 4027 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 OR6B1-201ENST00000408922 1055 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
UBE4BO95155 OR2A12-201ENST00000408949 1046 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
UBE4BO95155 RN7SKP110-201ENST00000410146 285 ntBASIC9.69□□□□□ -0.86
UBE4BO95155 AL669831.5-219ENST00000443772 417 ntTSL 3 BASIC9.69□□□□□ -0.86
UBE4BO95155 AL357127.1-201ENST00000451295 438 ntTSL 3 BASIC9.69□□□□□ -0.86
UBE4BO95155 LINC01738-201ENST00000454285 815 ntTSL 3 BASIC9.69□□□□□ -0.86
UBE4BO95155 HSPD1P18-201ENST00000504252 244 ntBASIC9.69□□□□□ -0.86
UBE4BO95155 SAP30L-AS1-204ENST00000524264 1039 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 AP005435.2-201ENST00000525489 590 ntBASIC9.69□□□□□ -0.86
UBE4BO95155 OR7E8P-201ENST00000532847 1000 ntBASIC9.69□□□□□ -0.86
UBE4BO95155 AC090625.2-201ENST00000534165 518 ntTSL 3 BASIC9.69□□□□□ -0.86
UBE4BO95155 AMN1-207ENST00000536761 1025 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE4BO95155 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC9.69□□□□□ -0.86
UBE4BO95155 AMN1-212ENST00000542781 879 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 PCED1B-AS1-205ENST00000548222 625 ntTSL 3 BASIC9.69□□□□□ -0.86
UBE4BO95155 AC127029.1-201ENST00000560822 237 ntBASIC9.69□□□□□ -0.86
UBE4BO95155 WFDC21P-207ENST00000590346 630 ntTSL 3 BASIC9.69□□□□□ -0.86
UBE4BO95155 TEX26-AS1-215ENST00000591300 815 ntTSL 5 BASIC9.69□□□□□ -0.86
UBE4BO95155 AC005779.1-201ENST00000591569 540 ntTSL 3 BASIC9.69□□□□□ -0.86
UBE4BO95155 Metazoa_SRP.98-201ENST00000610878 274 ntBASIC9.69□□□□□ -0.86
UBE4BO95155 CCL4L2-218ENST00000620576 652 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 MIGA1-202ENST00000443751 6409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC9.69□□□□□ -0.86
UBE4BO95155 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE4BO95155 OTOA-201ENST00000286149 3471 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
UBE4BO95155 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE4BO95155 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 STAT4-201ENST00000358470 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 EGF-206ENST00000509793 4489 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE4BO95155 AC122688.4-201ENST00000623279 4394 ntBASIC9.69□□□□□ -0.86
UBE4BO95155 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 SNX27-201ENST00000368838 1308 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 PLP1-223ENST00000621218 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
UBE4BO95155 ENTPD1-AS1-211ENST00000454638 2933 ntTSL 2 BASIC9.69□□□□□ -0.86
UBE4BO95155 SOSTDC1-201ENST00000307068 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE4BO95155 FAM222B-201ENST00000341217 4033 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE4BO95155 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
UBE4BO95155 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 GNPDA2-201ENST00000295448 1930 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 C8orf44-SGK3-201ENST00000519289 2949 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
UBE4BO95155 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
UBE4BO95155 EMC4-202ENST00000267750 1036 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 IDSP1-201ENST00000324799 376 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 TAGAP-202ENST00000338313 1183 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 Metazoa_SRP.5-201ENST00000356560 281 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 RN7SKP10-201ENST00000364291 325 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 IGLV3-1-201ENST00000390319 398 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
UBE4BO95155 U3.17-201ENST00000390863 203 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 HPN-AS1-201ENST00000392227 1124 ntTSL 2 BASIC9.68□□□□□ -0.86
UBE4BO95155 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE4BO95155 MRPS31P5-202ENST00000423686 920 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 AL355863.1-201ENST00000424331 293 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 TTC4P1-201ENST00000427137 1158 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE4BO95155 DAB1-AS1-203ENST00000432897 656 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE4BO95155 CYP2C58P-201ENST00000436281 475 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 AC002480.1-201ENST00000442252 1282 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 AC020718.1-201ENST00000456031 556 ntTSL 4 BASIC9.68□□□□□ -0.86
UBE4BO95155 AC107302.1-201ENST00000467059 1032 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 AC091152.1-201ENST00000472109 838 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 AL020996.2-202ENST00000527604 334 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
UBE4BO95155 PRSS58-201ENST00000547058 913 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
UBE4BO95155 AC055716.3-201ENST00000547533 761 ntTSL 3 BASIC9.68□□□□□ -0.86
UBE4BO95155 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC9.68□□□□□ -0.86
UBE4BO95155 AC012414.3-201ENST00000559621 748 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE4BO95155 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC9.68□□□□□ -0.86
UBE4BO95155 AC137527.1-201ENST00000565839 1261 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 RN7SL371P-201ENST00000578099 267 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 OR7A3P-201ENST00000595284 907 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE4BO95155 TRMT112P7-201ENST00000603133 367 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 AC093726.2-201ENST00000609134 679 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 AP003072.3-201ENST00000623456 594 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 AC005086.2-201ENST00000624939 228 ntBASIC9.68□□□□□ -0.86
UBE4BO95155 LINC00710-219ENST00000635054 938 ntTSL 5 BASIC9.68□□□□□ -0.86
UBE4BO95155 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 235.7 ms