Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4BQ9Y4P1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 CYP2T1P-201ENST00000432607 1285 ntBASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 RARRES2P4-201ENST00000514074 484 ntBASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 MIR2861-201ENST00000636310 90 ntBASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 AC073314.1-201ENST00000568729 2216 ntBASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4BQ9Y4P1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 AC005181.1-201ENST00000604782 1256 ntBASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 RAP2CP1-201ENST00000605103 478 ntBASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ATG4BQ9Y4P1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATG4BQ9Y4P1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATG4BQ9Y4P1 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
ATG4BQ9Y4P1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATG4BQ9Y4P1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.33■□□□□ 0.69
ATG4BQ9Y4P1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATG4BQ9Y4P1 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATG4BQ9Y4P1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.33■□□□□ 0.69
ATG4BQ9Y4P1 AC092667.1-201ENST00000434301 2586 ntBASIC19.33■□□□□ 0.69
ATG4BQ9Y4P1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.33■□□□□ 0.68
ATG4BQ9Y4P1 AC026185.1-201ENST00000445748 174 ntBASIC19.33■□□□□ 0.68
ATG4BQ9Y4P1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.33■□□□□ 0.68
ATG4BQ9Y4P1 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.33■□□□□ 0.68
ATG4BQ9Y4P1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms