Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.31■□□□□ 0.68
Ssr1Q9CY50 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ssr1Q9CY50 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ssr1Q9CY50 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Gm7514-201ENSMUST00000209475 934 ntBASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ssr1Q9CY50 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ssr1Q9CY50 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr1Q9CY50 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr1Q9CY50 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.27■□□□□ 0.68
Ssr1Q9CY50 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr1Q9CY50 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.27■□□□□ 0.68
Ssr1Q9CY50 Gm42642-201ENSMUST00000200683 355 ntBASIC19.27■□□□□ 0.68
Ssr1Q9CY50 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.27■□□□□ 0.68
Ssr1Q9CY50 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr1Q9CY50 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.27■□□□□ 0.68
Ssr1Q9CY50 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr1Q9CY50 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ssr1Q9CY50 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssr1Q9CY50 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssr1Q9CY50 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Ssr1Q9CY50 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssr1Q9CY50 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.27■□□□□ 0.67
Ssr1Q9CY50 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssr1Q9CY50 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssr1Q9CY50 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Gm5874-201ENSMUST00000096101 508 ntBASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Gm45141-201ENSMUST00000206502 1888 ntBASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr1Q9CY50 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.25■□□□□ 0.67
Ssr1Q9CY50 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms