Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL589743.5-201ENST00000616611 1050 ntBASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SSBP3Q9BWW4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 DUSP5P2-201ENST00000426873 1033 ntBASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 AC091874.3-201ENST00000512672 1195 ntBASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 CYP21A1P-202ENST00000354927 1481 ntBASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SSBP3Q9BWW4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 KRT18P68-201ENST00000392293 1000 ntBASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 KRT17P1-201ENST00000399211 1546 ntBASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SSBP3Q9BWW4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SSBP3Q9BWW4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 PGM5P4-201ENST00000421970 445 ntBASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSBP3Q9BWW4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SSBP3Q9BWW4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSBP3Q9BWW4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms