Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTP4A1Q93096 AC019069.1-201ENST00000610008 1333 ntBASIC18.36■□□□□ 0.53
PTP4A1Q93096 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.36■□□□□ 0.53
PTP4A1Q93096 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.36■□□□□ 0.53
PTP4A1Q93096 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PTP4A1Q93096 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A1Q93096 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A1Q93096 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.35■□□□□ 0.53
PTP4A1Q93096 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A1Q93096 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.35■□□□□ 0.53
PTP4A1Q93096 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.35■□□□□ 0.53
PTP4A1Q93096 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A1Q93096 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PTP4A1Q93096 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A1Q93096 AC123595.1-201ENST00000440769 1046 ntBASIC18.35■□□□□ 0.53
PTP4A1Q93096 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.35■□□□□ 0.53
PTP4A1Q93096 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
PTP4A1Q93096 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.35■□□□□ 0.53
PTP4A1Q93096 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A1Q93096 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTP4A1Q93096 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
PTP4A1Q93096 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A1Q93096 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A1Q93096 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTP4A1Q93096 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.35■□□□□ 0.53
PTP4A1Q93096 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PTP4A1Q93096 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTP4A1Q93096 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTP4A1Q93096 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTP4A1Q93096 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.34■□□□□ 0.53
PTP4A1Q93096 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.34■□□□□ 0.53
PTP4A1Q93096 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTP4A1Q93096 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTP4A1Q93096 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PTP4A1Q93096 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTP4A1Q93096 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.34■□□□□ 0.53
PTP4A1Q93096 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTP4A1Q93096 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTP4A1Q93096 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTP4A1Q93096 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTP4A1Q93096 AC138907.5-202ENST00000569484 235 ntBASIC18.34■□□□□ 0.53
PTP4A1Q93096 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PTP4A1Q93096 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.34■□□□□ 0.53
PTP4A1Q93096 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.34■□□□□ 0.53
PTP4A1Q93096 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PTP4A1Q93096 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PTP4A1Q93096 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PTP4A1Q93096 KRT87P-202ENST00000534226 1464 ntBASIC18.33■□□□□ 0.53
PTP4A1Q93096 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PTP4A1Q93096 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.33■□□□□ 0.53
PTP4A1Q93096 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.33■□□□□ 0.53
PTP4A1Q93096 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PTP4A1Q93096 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PTP4A1Q93096 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
PTP4A1Q93096 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTP4A1Q93096 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTP4A1Q93096 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PTP4A1Q93096 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTP4A1Q93096 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.33■□□□□ 0.52
PTP4A1Q93096 AC079140.4-201ENST00000507448 529 ntBASIC18.33■□□□□ 0.52
PTP4A1Q93096 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTP4A1Q93096 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.33■□□□□ 0.52
PTP4A1Q93096 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.33■□□□□ 0.52
PTP4A1Q93096 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PTP4A1Q93096 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PTP4A1Q93096 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.33■□□□□ 0.52
PTP4A1Q93096 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.33■□□□□ 0.52
PTP4A1Q93096 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PTP4A1Q93096 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.33■□□□□ 0.52
PTP4A1Q93096 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
PTP4A1Q93096 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 LINC02228-203ENST00000641970 1355 ntBASIC18.32■□□□□ 0.52
PTP4A1Q93096 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PTP4A1Q93096 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PTP4A1Q93096 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.32■□□□□ 0.52
PTP4A1Q93096 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.32■□□□□ 0.52
PTP4A1Q93096 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.32■□□□□ 0.52
PTP4A1Q93096 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.32■□□□□ 0.52
PTP4A1Q93096 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.32■□□□□ 0.52
PTP4A1Q93096 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PTP4A1Q93096 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PTP4A1Q93096 KRT16P2-201ENST00000414673 1423 ntBASIC18.32■□□□□ 0.52
PTP4A1Q93096 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.32■□□□□ 0.52
PTP4A1Q93096 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.31■□□□□ 0.52
PTP4A1Q93096 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTP4A1Q93096 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTP4A1Q93096 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTP4A1Q93096 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PTP4A1Q93096 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms