Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 AC107956.1-201ENST00000494359 873 ntBASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 MTDHP1-201ENST00000605323 784 ntBASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SYNPOQ8N3V7 AL135905.2-201ENST00000584934 1404 ntBASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 AC010542.4-201ENST00000563151 1910 ntBASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYNPOQ8N3V7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 AC026471.6-201ENST00000622954 1905 ntBASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 PGM5P4-201ENST00000421970 445 ntBASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYNPOQ8N3V7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.85■□□□□ 0.93
SYNPOQ8N3V7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 BX088651.1-201ENST00000540551 451 ntBASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 AC124016.1-201ENST00000609552 612 ntBASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 AC120498.8-201ENST00000614275 531 ntBASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYNPOQ8N3V7 AC087633.2-202ENST00000565166 1439 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms