Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.36■■□□□ 1.01
SCML4Q8N228 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCML4Q8N228 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SCML4Q8N228 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCML4Q8N228 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.36■■□□□ 1.01
SCML4Q8N228 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.36■■□□□ 1.01
SCML4Q8N228 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SCML4Q8N228 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SCML4Q8N228 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCML4Q8N228 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SCML4Q8N228 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCML4Q8N228 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCML4Q8N228 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SCML4Q8N228 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCML4Q8N228 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.35■■□□□ 1.01
SCML4Q8N228 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCML4Q8N228 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCML4Q8N228 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.35■■□□□ 1.01
SCML4Q8N228 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCML4Q8N228 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.35■■□□□ 1.01
SCML4Q8N228 DUSP5P2-201ENST00000426873 1033 ntBASIC21.35■■□□□ 1.01
SCML4Q8N228 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.35■■□□□ 1.01
SCML4Q8N228 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.35■■□□□ 1.01
SCML4Q8N228 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.35■■□□□ 1.01
SCML4Q8N228 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.35■■□□□ 1.01
SCML4Q8N228 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.35■■□□□ 1.01
SCML4Q8N228 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCML4Q8N228 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SCML4Q8N228 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCML4Q8N228 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCML4Q8N228 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCML4Q8N228 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SCML4Q8N228 AC097658.1-201ENST00000475555 843 ntBASIC21.34■■□□□ 1.01
SCML4Q8N228 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.34■■□□□ 1.01
SCML4Q8N228 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCML4Q8N228 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCML4Q8N228 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCML4Q8N228 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SCML4Q8N228 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SCML4Q8N228 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.33■■□□□ 1.01
SCML4Q8N228 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCML4Q8N228 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.33■■□□□ 1.01
SCML4Q8N228 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCML4Q8N228 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
SCML4Q8N228 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SCML4Q8N228 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SCML4Q8N228 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SCML4Q8N228 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.33■■□□□ 1.01
SCML4Q8N228 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1
SCML4Q8N228 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SCML4Q8N228 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SCML4Q8N228 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.32■■□□□ 1
SCML4Q8N228 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SCML4Q8N228 AC007225.1-201ENST00000566331 1836 ntBASIC21.32■■□□□ 1
SCML4Q8N228 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCML4Q8N228 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCML4Q8N228 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.32■■□□□ 1
SCML4Q8N228 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.32■■□□□ 1
SCML4Q8N228 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.32■■□□□ 1
SCML4Q8N228 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.32■■□□□ 1
SCML4Q8N228 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SCML4Q8N228 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCML4Q8N228 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.32■■□□□ 1
SCML4Q8N228 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.32■■□□□ 1
SCML4Q8N228 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SCML4Q8N228 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SCML4Q8N228 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCML4Q8N228 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.31■■□□□ 1
SCML4Q8N228 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCML4Q8N228 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.31■■□□□ 1
SCML4Q8N228 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCML4Q8N228 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SCML4Q8N228 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.31■■□□□ 1
SCML4Q8N228 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.31■■□□□ 1
SCML4Q8N228 C2orf69P4-201ENST00000565394 541 ntBASIC21.31■■□□□ 1
SCML4Q8N228 AC083880.1-201ENST00000608266 535 ntBASIC21.31■■□□□ 1
SCML4Q8N228 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCML4Q8N228 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
SCML4Q8N228 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.31■■□□□ 1
SCML4Q8N228 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SCML4Q8N228 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SCML4Q8N228 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCML4Q8N228 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
SCML4Q8N228 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
SCML4Q8N228 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCML4Q8N228 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.3■■□□□ 1
SCML4Q8N228 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.3■■□□□ 1
SCML4Q8N228 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SCML4Q8N228 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.3■■□□□ 1
SCML4Q8N228 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.3■■□□□ 1
SCML4Q8N228 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SCML4Q8N228 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.3■■□□□ 1
SCML4Q8N228 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.3■■□□□ 1
SCML4Q8N228 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.3■■□□□ 1
SCML4Q8N228 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SCML4Q8N228 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SCML4Q8N228 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCML4Q8N228 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SCML4Q8N228 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.29■■□□□ 1
SCML4Q8N228 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms