Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Hmx3P42581 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Hmx3P42581 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Hmx3P42581 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.84□□□□□ -0.03
Hmx3P42581 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Gm27801-201ENSMUST00000184174 223 ntBASIC14.84□□□□□ -0.03
Hmx3P42581 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Hmx3P42581 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Hmx3P42581 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.84□□□□□ -0.03
Hmx3P42581 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.84□□□□□ -0.03
Hmx3P42581 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hmx3P42581 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Hmx3P42581 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Hmx3P42581 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmx3P42581 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.83□□□□□ -0.03
Hmx3P42581 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmx3P42581 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmx3P42581 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmx3P42581 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmx3P42581 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Hmx3P42581 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Hmx3P42581 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hmx3P42581 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Hmx3P42581 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Hmx3P42581 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.83□□□□□ -0.04
Hmx3P42581 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Hmx3P42581 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hmx3P42581 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hmx3P42581 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.83□□□□□ -0.04
Hmx3P42581 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hmx3P42581 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmx3P42581 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hmx3P42581 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmx3P42581 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmx3P42581 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Hmx3P42581 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmx3P42581 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmx3P42581 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Hmx3P42581 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.82□□□□□ -0.04
Hmx3P42581 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.82□□□□□ -0.04
Hmx3P42581 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Hmx3P42581 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmx3P42581 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Hmx3P42581 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hmx3P42581 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.82□□□□□ -0.04
Hmx3P42581 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hmx3P42581 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hmx3P42581 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hmx3P42581 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmx3P42581 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmx3P42581 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmx3P42581 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hmx3P42581 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Hmx3P42581 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hmx3P42581 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmx3P42581 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmx3P42581 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hmx3P42581 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms