Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sh2d1aO88890 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Sh2d1aO88890 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.6□□□□□ -0.39
Sh2d1aO88890 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sh2d1aO88890 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.59□□□□□ -0.39
Sh2d1aO88890 AC121961.1-201ENSMUST00000218594 1779 ntBASIC12.59□□□□□ -0.39
Sh2d1aO88890 Ddx41-204ENSMUST00000224765 2199 ntBASIC12.59□□□□□ -0.39
Sh2d1aO88890 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Gm8495-201ENSMUST00000188740 694 ntBASIC12.59□□□□□ -0.39
Sh2d1aO88890 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Gm6365-201ENSMUST00000054711 744 ntBASIC12.59□□□□□ -0.39
Sh2d1aO88890 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sh2d1aO88890 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sh2d1aO88890 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sh2d1aO88890 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sh2d1aO88890 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sh2d1aO88890 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d1aO88890 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.57□□□□□ -0.4
Sh2d1aO88890 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Sh2d1aO88890 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d1aO88890 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Sh2d1aO88890 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d1aO88890 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d1aO88890 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d1aO88890 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sh2d1aO88890 Gm15039-201ENSMUST00000118914 875 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms