Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Gm18671-201ENSMUST00000214826 683 ntBASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
H2afb3S4R1G7 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2afb3S4R1G7 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2afb3S4R1G7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
H2afb3S4R1G7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.17
H2afb3S4R1G7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
H2afb3S4R1G7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Nespas-201ENSMUST00000143738 1083 ntBASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Gm7514-201ENSMUST00000209475 934 ntBASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb3S4R1G7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
H2afb3S4R1G7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2afb3S4R1G7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
H2afb3S4R1G7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
H2afb3S4R1G7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2afb3S4R1G7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms