Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 MIR2861-201ENST00000636310 90 ntBASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PHACTR1Q9C0D0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 PBX2P1-201ENST00000493219 1291 ntBASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PHACTR1Q9C0D0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PHACTR1Q9C0D0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 AF213884.3-201ENST00000563833 479 ntBASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PHACTR1Q9C0D0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 AL358852.1-201ENST00000623174 1268 ntBASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 AC112907.3-201ENST00000577781 2400 ntBASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.77■□□□□ 0.92
PHACTR1Q9C0D0 AC116050.2-201ENST00000612102 1779 ntBASIC20.77■□□□□ 0.91
PHACTR1Q9C0D0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PHACTR1Q9C0D0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHACTR1Q9C0D0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHACTR1Q9C0D0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.76■□□□□ 0.91
PHACTR1Q9C0D0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PHACTR1Q9C0D0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHACTR1Q9C0D0 AC079140.4-201ENST00000507448 529 ntBASIC20.76■□□□□ 0.91
PHACTR1Q9C0D0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PHACTR1Q9C0D0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHACTR1Q9C0D0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
PHACTR1Q9C0D0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.76■□□□□ 0.91
PHACTR1Q9C0D0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PHACTR1Q9C0D0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.75■□□□□ 0.91
PHACTR1Q9C0D0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms