Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A3Q93084 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A3Q93084 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A3Q93084 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A3Q93084 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A3Q93084 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ATP2A3Q93084 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.55■■□□□ 1.04
ATP2A3Q93084 AC083880.1-201ENST00000608266 535 ntBASIC21.55■■□□□ 1.04
ATP2A3Q93084 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A3Q93084 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
ATP2A3Q93084 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A3Q93084 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.55■■□□□ 1.04
ATP2A3Q93084 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A3Q93084 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ATP2A3Q93084 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
ATP2A3Q93084 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
ATP2A3Q93084 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP2A3Q93084 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.55■■□□□ 1.04
ATP2A3Q93084 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A3Q93084 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A3Q93084 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP2A3Q93084 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A3Q93084 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A3Q93084 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.54■■□□□ 1.04
ATP2A3Q93084 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.54■■□□□ 1.04
ATP2A3Q93084 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A3Q93084 AC066615.1-201ENST00000640911 628 ntBASIC21.54■■□□□ 1.04
ATP2A3Q93084 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A3Q93084 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP2A3Q93084 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A3Q93084 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A3Q93084 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A3Q93084 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ATP2A3Q93084 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP2A3Q93084 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ATP2A3Q93084 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ATP2A3Q93084 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ATP2A3Q93084 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A3Q93084 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
ATP2A3Q93084 AC091874.3-201ENST00000512672 1195 ntBASIC21.53■■□□□ 1.04
ATP2A3Q93084 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.53■■□□□ 1.04
ATP2A3Q93084 ITM2C-210ENST00000620962 501 ntBASIC21.53■■□□□ 1.04
ATP2A3Q93084 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
ATP2A3Q93084 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A3Q93084 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ATP2A3Q93084 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A3Q93084 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
ATP2A3Q93084 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP2A3Q93084 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A3Q93084 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A3Q93084 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A3Q93084 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ATP2A3Q93084 DUSP5P2-201ENST00000426873 1033 ntBASIC21.52■■□□□ 1.04
ATP2A3Q93084 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.52■■□□□ 1.04
ATP2A3Q93084 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.52■■□□□ 1.04
ATP2A3Q93084 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.52■■□□□ 1.04
ATP2A3Q93084 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.52■■□□□ 1.04
ATP2A3Q93084 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.52■■□□□ 1.04
ATP2A3Q93084 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A3Q93084 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A3Q93084 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A3Q93084 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
ATP2A3Q93084 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
ATP2A3Q93084 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A3Q93084 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP2A3Q93084 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
ATP2A3Q93084 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A3Q93084 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A3Q93084 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A3Q93084 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP2A3Q93084 KRT18P29-201ENST00000397031 1267 ntBASIC21.51■■□□□ 1.03
ATP2A3Q93084 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.51■■□□□ 1.03
ATP2A3Q93084 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP2A3Q93084 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
ATP2A3Q93084 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP2A3Q93084 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP2A3Q93084 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.51■■□□□ 1.03
ATP2A3Q93084 FAM21FP-204ENST00000608637 956 ntBASIC21.51■■□□□ 1.03
ATP2A3Q93084 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.51■■□□□ 1.03
ATP2A3Q93084 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A3Q93084 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A3Q93084 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A3Q93084 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP2A3Q93084 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ATP2A3Q93084 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A3Q93084 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP2A3Q93084 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATP2A3Q93084 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A3Q93084 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A3Q93084 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A3Q93084 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A3Q93084 LSM12P1-201ENST00000411836 588 ntBASIC21.5■■□□□ 1.03
ATP2A3Q93084 AC091799.1-201ENST00000422823 811 ntBASIC21.5■■□□□ 1.03
ATP2A3Q93084 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A3Q93084 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATP2A3Q93084 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.5■■□□□ 1.03
ATP2A3Q93084 CDV3P1-201ENST00000471403 739 ntBASIC21.5■■□□□ 1.03
ATP2A3Q93084 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
ATP2A3Q93084 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.5■■□□□ 1.03
ATP2A3Q93084 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms