Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 AC004854.2-201ENST00000608450 1441 ntBASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.67■□□□□ 0.9
CFAP61Q8NHU2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 MIR5787-201ENST00000611784 55 ntBASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 GABARAPL3-202ENST00000624044 1851 ntBASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CFAP61Q8NHU2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 NTF6G-201ENST00000591094 616 ntBASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 AC104187.1-201ENST00000607510 612 ntBASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CFAP61Q8NHU2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CFAP61Q8NHU2 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CFAP61Q8NHU2 AP004607.4-201ENST00000530158 1459 ntBASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CFAP61Q8NHU2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 EEF1DP3-203ENST00000566025 782 ntBASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 AC053503.5-201ENST00000601508 636 ntBASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CFAP61Q8NHU2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms