Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
HIST3H2BBQ8N257 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 AC011270.2-201ENST00000624293 2550 ntBASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 AC104581.1-202ENST00000635932 2618 ntBASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 MIR3960-201ENST00000583311 91 ntBASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
HIST3H2BBQ8N257 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 KRT18P10-201ENST00000388836 1287 ntBASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 AC126177.7-201ENST00000547904 679 ntBASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 AC009113.1-201ENST00000570267 2443 ntBASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 AC068880.1-201ENST00000507289 2297 ntBASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
HIST3H2BBQ8N257 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 RARRES2P7-201ENST00000567349 469 ntBASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HIST3H2BBQ8N257 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms