Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alms1Q8K4E0 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Alms1Q8K4E0 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Alms1Q8K4E0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Gm7284-201ENSMUST00000131667 944 ntBASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.51■□□□□ 0.39
Alms1Q8K4E0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alms1Q8K4E0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC17.5■□□□□ 0.39
Alms1Q8K4E0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Alms1Q8K4E0 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.5■□□□□ 0.39
Alms1Q8K4E0 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.5■□□□□ 0.39
Alms1Q8K4E0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alms1Q8K4E0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alms1Q8K4E0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alms1Q8K4E0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alms1Q8K4E0 Gm12085-201ENSMUST00000119263 940 ntBASIC17.5■□□□□ 0.39
Alms1Q8K4E0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Alms1Q8K4E0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.5■□□□□ 0.39
Alms1Q8K4E0 Gm45058-201ENSMUST00000205810 766 ntBASIC17.5■□□□□ 0.39
Alms1Q8K4E0 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.5■□□□□ 0.39
Alms1Q8K4E0 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alms1Q8K4E0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alms1Q8K4E0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Alms1Q8K4E0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alms1Q8K4E0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alms1Q8K4E0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.49■□□□□ 0.39
Alms1Q8K4E0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Alms1Q8K4E0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Alms1Q8K4E0 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.49■□□□□ 0.39
Alms1Q8K4E0 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Alms1Q8K4E0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Mir6349-201ENSMUST00000184059 97 ntBASIC17.48■□□□□ 0.39
Alms1Q8K4E0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Gm38285-201ENSMUST00000192928 922 ntBASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Alms1Q8K4E0 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Alms1Q8K4E0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Alms1Q8K4E0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Alms1Q8K4E0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alms1Q8K4E0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alms1Q8K4E0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Alms1Q8K4E0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.45■□□□□ 0.38
Alms1Q8K4E0 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alms1Q8K4E0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Alms1Q8K4E0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Alms1Q8K4E0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms