Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Gm13534-201ENSMUST00000121169 513 ntBASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Gm8495-201ENSMUST00000188740 694 ntBASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ckap4Q8BMK4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Gm10033-202ENSMUST00000211874 928 ntBASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.92■□□□□ 0.3
Ckap4Q8BMK4 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.91■□□□□ 0.3
Ckap4Q8BMK4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Gm7514-201ENSMUST00000209475 934 ntBASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ckap4Q8BMK4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ckap4Q8BMK4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ckap4Q8BMK4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 AV356131-201ENSMUST00000206201 750 ntBASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ckap4Q8BMK4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ckap4Q8BMK4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms