Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00575Q6W349 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
LINC00575Q6W349 ATP5G2P3-201ENST00000429083 425 ntBASIC12.99□□□□□ -0.33
LINC00575Q6W349 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 AC103724.3-201ENST00000564481 992 ntBASIC12.99□□□□□ -0.33
LINC00575Q6W349 pRNA.6-201ENST00000610482 90 ntBASIC12.99□□□□□ -0.33
LINC00575Q6W349 pRNA.5-201ENST00000612139 90 ntBASIC12.99□□□□□ -0.33
LINC00575Q6W349 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00575Q6W349 pRNA.11-201ENST00000618423 90 ntBASIC12.99□□□□□ -0.33
LINC00575Q6W349 pRNA.13-201ENST00000619112 90 ntBASIC12.99□□□□□ -0.33
LINC00575Q6W349 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
LINC00575Q6W349 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC00575Q6W349 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00575Q6W349 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC12.99□□□□□ -0.33
LINC00575Q6W349 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
LINC00575Q6W349 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
LINC00575Q6W349 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC00575Q6W349 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00575Q6W349 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LINC00575Q6W349 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 AC004987.1-201ENST00000428627 508 ntBASIC12.98□□□□□ -0.33
LINC00575Q6W349 OR2I1P-207ENST00000453522 948 ntBASIC12.98□□□□□ -0.33
LINC00575Q6W349 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LINC00575Q6W349 MBP-237ENST00000579129 1052 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00575Q6W349 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC00575Q6W349 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
LINC00575Q6W349 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC12.98□□□□□ -0.33
LINC00575Q6W349 AC092720.2-201ENST00000602388 1665 ntBASIC12.98□□□□□ -0.33
LINC00575Q6W349 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
LINC00575Q6W349 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
LINC00575Q6W349 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC12.98□□□□□ -0.33
LINC00575Q6W349 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 AL158211.5-201ENST00000623583 2518 ntBASIC12.97□□□□□ -0.33
LINC00575Q6W349 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 CD72-202ENST00000378430 585 ntTSL 3 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 TFPT-201ENST00000391757 774 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 HES6-204ENST00000409182 863 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC12.97□□□□□ -0.33
LINC00575Q6W349 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
LINC00575Q6W349 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00575Q6W349 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00575Q6W349 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00575Q6W349 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC12.96□□□□□ -0.33
LINC00575Q6W349 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
LINC00575Q6W349 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00575Q6W349 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LINC00575Q6W349 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00575Q6W349 AC125437.2-201ENST00000625180 2167 ntBASIC12.96□□□□□ -0.33
LINC00575Q6W349 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
LINC00575Q6W349 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
LINC00575Q6W349 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms