Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CTC1Q2NKJ3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTC1Q2NKJ3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CTC1Q2NKJ3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CTC1Q2NKJ3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTC1Q2NKJ3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.99■■□□□ 1.11
CTC1Q2NKJ3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 RPS2P55-201ENST00000397318 883 ntBASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 POM121L13P-201ENST00000422362 380 ntBASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 AC107956.1-201ENST00000494359 873 ntBASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 KRT17P2-201ENST00000300992 1314 ntBASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.98■■□□□ 1.11
CTC1Q2NKJ3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 KRT18P68-201ENST00000392293 1000 ntBASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTC1Q2NKJ3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 C11orf96-202ENST00000528572 1834 ntBASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTC1Q2NKJ3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CTC1Q2NKJ3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.95■■□□□ 1.11
CTC1Q2NKJ3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 FBXW4P1-201ENST00000426721 2239 ntBASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 TSPY7P-201ENST00000431358 1114 ntBASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.95■■□□□ 1.1
CTC1Q2NKJ3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CTC1Q2NKJ3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CTC1Q2NKJ3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms