Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 DNM1YLL001W 2274 nt3.81□□□□□ -1.8
MSH3P25336 VHR2YER064C 1518 nt3.8□□□□□ -1.8
MSH3P25336 ARK1YNL020C 1917 nt3.8□□□□□ -1.8
MSH3P25336 BLI1YKL061W 342 nt3.8□□□□□ -1.8
MSH3P25336 NOT5YPR072W 1683 nt3.8□□□□□ -1.8
MSH3P25336 HFM1YGL251C 3564 nt3.79□□□□□ -1.8
MSH3P25336 CIN1YOR349W 3045 nt3.79□□□□□ -1.8
MSH3P25336 YPR022CYPR022C 3402 nt3.79□□□□□ -1.8
MSH3P25336 YGR237CYGR237C 2358 nt3.79□□□□□ -1.8
MSH3P25336 SUP56tL(CAA)A 82 nt3.79□□□□□ -1.8
MSH3P25336 SUP53tL(CAA)C 82 nt3.79□□□□□ -1.8
MSH3P25336 tL(CAA)DtL(CAA)D 82 nt3.79□□□□□ -1.8
MSH3P25336 tL(CAA)G1tL(CAA)G1 82 nt3.79□□□□□ -1.8
MSH3P25336 SUP54tL(CAA)G2 82 nt3.79□□□□□ -1.8
MSH3P25336 tL(CAA)G3tL(CAA)G3 82 nt3.79□□□□□ -1.8
MSH3P25336 tL(CAA)KtL(CAA)K 82 nt3.79□□□□□ -1.8
MSH3P25336 tL(CAA)LtL(CAA)L 82 nt3.79□□□□□ -1.8
MSH3P25336 tL(CAA)MtL(CAA)M 82 nt3.79□□□□□ -1.8
MSH3P25336 tL(CAA)NtL(CAA)N 82 nt3.79□□□□□ -1.8
MSH3P25336 DLS1YJL065C 504 nt3.79□□□□□ -1.8
MSH3P25336 RPL9BYNL067W 576 nt3.79□□□□□ -1.8
MSH3P25336 HEM4YOR278W 828 nt3.79□□□□□ -1.8
MSH3P25336 ATP25YMR098C 1839 nt3.79□□□□□ -1.8
MSH3P25336 SNF12YNR023W 1701 nt3.78□□□□□ -1.8
MSH3P25336 RAD4YER162C 2265 nt3.78□□□□□ -1.8
MSH3P25336 OSH6YKR003W 1347 nt3.78□□□□□ -1.8
MSH3P25336 PWP2YCR057C 2772 nt3.78□□□□□ -1.8
MSH3P25336 FAP7YDL166C 594 nt3.78□□□□□ -1.8
MSH3P25336 TSA2YDR453C 591 nt3.78□□□□□ -1.8
MSH3P25336 PAU14YIL176C 363 nt3.78□□□□□ -1.8
MSH3P25336 PAU1YJL223C 363 nt3.78□□□□□ -1.8
MSH3P25336 YLR294CYLR294C 330 nt3.78□□□□□ -1.8
MSH3P25336 YBL073WYBL073W 312 nt3.78□□□□□ -1.8
MSH3P25336 YPL229WYPL229W 621 nt3.78□□□□□ -1.8
MSH3P25336 LCB5YLR260W 2064 nt3.78□□□□□ -1.8
MSH3P25336 PKH1YDR490C 2301 nt3.78□□□□□ -1.8
MSH3P25336 FAR1YJL157C 2493 nt3.78□□□□□ -1.8
MSH3P25336 YMR317WYMR317W 3423 nt3.77□□□□□ -1.81
MSH3P25336 RNR1YER070W 2667 nt3.77□□□□□ -1.81
MSH3P25336 YDR169C-AYDR169C-A 150 nt3.77□□□□□ -1.81
MSH3P25336 JEN1YKL217W 1851 nt3.77□□□□□ -1.81
MSH3P25336 ETP1YHL010C 1758 nt3.76□□□□□ -1.81
MSH3P25336 YKL033W-AYKL033W-A 711 nt3.76□□□□□ -1.81
MSH3P25336 RFC3YNL290W 1023 nt3.76□□□□□ -1.81
MSH3P25336 YEL025CYEL025C 3567 nt3.76□□□□□ -1.81
MSH3P25336 RRP5YMR229C 5190 nt3.75□□□□□ -1.81
MSH3P25336 GYL1YMR192W 2163 nt3.75□□□□□ -1.81
MSH3P25336 CYC7YEL039C 342 nt3.75□□□□□ -1.81
MSH3P25336 RPB9YGL070C 369 nt3.75□□□□□ -1.81
MSH3P25336 YMR046W-AYMR046W-A 129 nt3.75□□□□□ -1.81
MSH3P25336 NMA111YNL123W 2994 nt3.75□□□□□ -1.81
MSH3P25336 RPL30YGL030W 318 nt3.74□□□□□ -1.81
MSH3P25336 tT(UGU)Q1tT(UGU)Q1 76 nt3.74□□□□□ -1.81
MSH3P25336 RPS28BYLR264W 204 nt3.74□□□□□ -1.81
MSH3P25336 RSM19YNR037C 276 nt3.74□□□□□ -1.81
MSH3P25336 EGD1YPL037C 474 nt3.74□□□□□ -1.81
MSH3P25336 YGR027W-BYGR027W-B 5268 nt3.74□□□□□ -1.81
MSH3P25336 YLR227W-BYLR227W-B 5268 nt3.74□□□□□ -1.81
MSH3P25336 YPR158C-DYPR158C-D 5268 nt3.74□□□□□ -1.81
MSH3P25336 CCM1YGR150C 2595 nt3.74□□□□□ -1.81
MSH3P25336 AUS1YOR011W 4185 nt3.74□□□□□ -1.81
MSH3P25336 TRZ1YKR079C 2517 nt3.74□□□□□ -1.81
MSH3P25336 GIS4YML006C 2325 nt3.73□□□□□ -1.81
MSH3P25336 LYS9YNR050C 1341 nt3.73□□□□□ -1.81
MSH3P25336 PSF1YDR013W 627 nt3.73□□□□□ -1.81
MSH3P25336 YDR250CYDR250C 276 nt3.73□□□□□ -1.81
MSH3P25336 YEL032C-AYEL032C-A 162 nt3.73□□□□□ -1.81
MSH3P25336 HYR1YIR037W 492 nt3.73□□□□□ -1.81
MSH3P25336 AIM26YKL037W 357 nt3.73□□□□□ -1.81
MSH3P25336 snR51snR51 107 nt3.73□□□□□ -1.81
MSH3P25336 TOP1YOL006C 2310 nt3.73□□□□□ -1.81
MSH3P25336 CHS3YBR023C 3498 nt3.73□□□□□ -1.81
MSH3P25336 SPO71YDR104C 3738 nt3.73□□□□□ -1.81
MSH3P25336 RSC1YGR056W 2787 nt3.73□□□□□ -1.81
MSH3P25336 SNT1YCR033W 3681 nt3.73□□□□□ -1.81
MSH3P25336 GSC2YGR032W 5688 nt3.72□□□□□ -1.81
MSH3P25336 ENA2YDR039C 3276 nt3.72□□□□□ -1.81
MSH3P25336 ENA1YDR040C 3276 nt3.72□□□□□ -1.81
MSH3P25336 PDC2YDR081C 2778 nt3.72□□□□□ -1.81
MSH3P25336 MIT1YEL007W 2001 nt3.72□□□□□ -1.81
MSH3P25336 MTC3YGL226W 372 nt3.72□□□□□ -1.81
MSH3P25336 TIM8YJR135W-A 264 nt3.72□□□□□ -1.81
MSH3P25336 RPS22BYLR367W 393 nt3.72□□□□□ -1.81
MSH3P25336 SPP382YLR424W 2127 nt3.72□□□□□ -1.81
MSH3P25336 HCH1YNL281W 462 nt3.72□□□□□ -1.81
MSH3P25336 RPS23BYPR132W 438 nt3.72□□□□□ -1.81
MSH3P25336 YBR085C-AYBR085C-A 258 nt3.72□□□□□ -1.81
MSH3P25336 STN1YDR082W 1485 nt3.72□□□□□ -1.81
MSH3P25336 TMA108YIL137C 2841 nt3.71□□□□□ -1.81
MSH3P25336 YCG1YDR325W 3108 nt3.71□□□□□ -1.82
MSH3P25336 COX1Q0045 1605 nt3.71□□□□□ -1.82
MSH3P25336 GIS2YNL255C 462 nt3.71□□□□□ -1.82
MSH3P25336 YPR077CYPR077C 372 nt3.71□□□□□ -1.82
MSH3P25336 YPR099CYPR099C 357 nt3.71□□□□□ -1.82
MSH3P25336 VPS53YJL029C 2469 nt3.71□□□□□ -1.82
MSH3P25336 DOA4YDR069C 2781 nt3.71□□□□□ -1.82
MSH3P25336 PCF11YDR228C 1881 nt3.71□□□□□ -1.82
MSH3P25336 RSF2YJR127C 4143 nt3.71□□□□□ -1.82
MSH3P25336 PHO81YGR233C 3537 nt3.7□□□□□ -1.82
MSH3P25336 SSY1YDR160W 2559 nt3.7□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 22.5 ms