Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
MMP2P08253 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.72■□□□□ 0.91
MMP2P08253 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
MMP2P08253 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.72■□□□□ 0.91
MMP2P08253 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MMP2P08253 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MMP2P08253 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.71■□□□□ 0.91
MMP2P08253 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.71■□□□□ 0.91
MMP2P08253 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
MMP2P08253 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.71■□□□□ 0.91
MMP2P08253 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
MMP2P08253 CYP21A1P-202ENST00000354927 1481 ntBASIC20.71■□□□□ 0.91
MMP2P08253 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
MMP2P08253 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.71■□□□□ 0.91
MMP2P08253 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MMP2P08253 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
MMP2P08253 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
MMP2P08253 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP2P08253 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MMP2P08253 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP2P08253 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.7■□□□□ 0.9
MMP2P08253 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP2P08253 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
MMP2P08253 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP2P08253 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP2P08253 MIR663A-201ENST00000385250 93 ntBASIC20.7■□□□□ 0.9
MMP2P08253 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.7■□□□□ 0.9
MMP2P08253 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP2P08253 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP2P08253 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.7■□□□□ 0.9
MMP2P08253 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MMP2P08253 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.7■□□□□ 0.9
MMP2P08253 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP2P08253 AC073314.1-201ENST00000568729 2216 ntBASIC20.7■□□□□ 0.9
MMP2P08253 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MMP2P08253 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MMP2P08253 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP2P08253 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MMP2P08253 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP2P08253 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP2P08253 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
MMP2P08253 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP2P08253 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
MMP2P08253 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP2P08253 AC093787.1-201ENST00000450396 207 ntBASIC20.69■□□□□ 0.9
MMP2P08253 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
MMP2P08253 OR10C1-204ENST00000622521 1039 ntBASIC20.69■□□□□ 0.9
MMP2P08253 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP2P08253 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.69■□□□□ 0.9
MMP2P08253 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP2P08253 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MMP2P08253 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP2P08253 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP2P08253 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.69■□□□□ 0.9
MMP2P08253 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP2P08253 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP2P08253 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MMP2P08253 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP2P08253 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
MMP2P08253 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.68■□□□□ 0.9
MMP2P08253 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP2P08253 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP2P08253 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP2P08253 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP2P08253 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.68■□□□□ 0.9
MMP2P08253 AC133552.2-202ENST00000575694 574 ntBASIC20.68■□□□□ 0.9
MMP2P08253 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.68■□□□□ 0.9
MMP2P08253 AC069236.1-201ENST00000604339 616 ntBASIC20.68■□□□□ 0.9
MMP2P08253 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP2P08253 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP2P08253 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP2P08253 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP2P08253 AP005212.1-201ENST00000581547 1997 ntBASIC20.68■□□□□ 0.9
MMP2P08253 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.68■□□□□ 0.9
MMP2P08253 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
MMP2P08253 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP2P08253 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.68■□□□□ 0.9
MMP2P08253 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP2P08253 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.68■□□□□ 0.9
MMP2P08253 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP2P08253 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP2P08253 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.67■□□□□ 0.9
MMP2P08253 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.67■□□□□ 0.9
MMP2P08253 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.67■□□□□ 0.9
MMP2P08253 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms