Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Dancr-204ENSMUST00000132389 2347 ntBASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Gm42501-201ENSMUST00000200220 1026 ntBASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trdv2-1A0A0G2JGB9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trdv2-1A0A0G2JGB9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms