Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RNA5SP452-201ENST00000363004 119 ntBASIC9.65□□□□□ -0.86
LMO3Q8TAP4 RN7SKP22-201ENST00000365097 293 ntBASIC9.65□□□□□ -0.86
LMO3Q8TAP4 UBE2C-205ENST00000372568 914 ntTSL 2 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 LIPK-201ENST00000404190 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 WISP3-205ENST00000409166 953 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 RNA5SP209-201ENST00000411237 97 ntBASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AC011999.1-201ENST00000424794 1024 ntBASIC9.65□□□□□ -0.86
LMO3Q8TAP4 ELOA-AS1-201ENST00000427796 1074 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AC092620.1-201ENST00000453636 680 ntTSL 3 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AL445673.1-201ENST00000455124 416 ntTSL 3 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AC027343.3-201ENST00000504494 564 ntTSL 4 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AC010368.1-201ENST00000510160 456 ntBASIC9.65□□□□□ -0.86
LMO3Q8TAP4 CXorf56-203ENST00000536133 1089 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AC073651.1-201ENST00000544015 465 ntTSL 3 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AC009139.1-201ENST00000561672 652 ntTSL 2 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 LSM3P5-201ENST00000566307 306 ntBASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AP005328.1-202ENST00000580781 776 ntTSL 3 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 KIR3DP1-201ENST00000580853 628 ntBASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AC233702.4-201ENST00000581610 304 ntBASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AC127381.3-201ENST00000622901 303 ntBASIC9.65□□□□□ -0.86
LMO3Q8TAP4 CACNA1D-202ENST00000350061 7636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 SLC24A4-205ENST00000532405 9950 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 LINC01929-201ENST00000589125 3067 ntTSL 2 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 AP002765.1-201ENST00000528675 1507 ntBASIC9.65□□□□□ -0.86
LMO3Q8TAP4 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
LMO3Q8TAP4 PCDHGA5-202ENST00000611914 3552 ntAPPRIS P1 BASIC9.65□□□□□ -0.87
LMO3Q8TAP4 CTNNA2-201ENST00000343114 2927 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
LMO3Q8TAP4 BCOR-201ENST00000342274 6390 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.87
LMO3Q8TAP4 ADAMTS12-201ENST00000352040 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
LMO3Q8TAP4 LINC00927-203ENST00000558913 2878 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
LMO3Q8TAP4 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
LMO3Q8TAP4 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
LMO3Q8TAP4 LILRA2-201ENST00000251376 4429 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 SLC36A3-201ENST00000335230 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 LRRC37A11P-201ENST00000425901 3580 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 BHLHB9-205ENST00000457056 4082 ntAPPRIS P1 TSL 4 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 CAB39-207ENST00000614925 1619 ntTSL 5 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 FBXO48-201ENST00000377957 5666 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 SYNPR-212ENST00000479198 2436 ntTSL 5 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AC104825.2-201ENST00000505448 3249 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 LINC01992-201ENST00000567574 1340 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 CBWD1-205ENST00000382389 1807 ntTSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 LINC01858-201ENST00000564534 1838 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 PDCD4-201ENST00000280154 3602 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 FAM120B-201ENST00000476287 5155 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 CEACAM8-201ENST00000244336 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 CNFN-201ENST00000222032 523 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 LIAS-201ENST00000261434 1258 ntTSL 5 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 GDF3-201ENST00000329913 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 KRTAP22-1-201ENST00000334680 296 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 PFDN5-203ENST00000351500 478 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 RNA5SP379-201ENST00000364599 113 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 RABL2A-201ENST00000376439 623 ntTSL 5 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AC097059.2-201ENST00000414039 592 ntTSL 3 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AC007036.2-201ENST00000415934 437 ntTSL 3 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 ACTG1P24-201ENST00000423783 877 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 FO393418.1-201ENST00000424761 510 ntTSL 4 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 TRIM26BP-206ENST00000427723 753 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 Z83841.1-201ENST00000433173 968 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AC010967.3-201ENST00000438648 213 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AC008069.1-201ENST00000444710 950 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 IFNA13-201ENST00000449498 634 ntAPPRIS ALT1 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 MYL6P1-201ENST00000449877 453 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 LINC02543-201ENST00000451285 845 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 RN7SL420P-201ENST00000463843 298 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 RPS28P7-201ENST00000473748 210 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AC093857.1-201ENST00000511603 760 ntTSL 5 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 IGLV1-41-201ENST00000519790 406 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 RSF1-IT1-201ENST00000528233 632 ntTSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AP001372.1-202ENST00000533008 344 ntTSL 3 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 PGA4-202ENST00000537932 840 ntTSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 PGA3-204ENST00000538258 867 ntTSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 PGA3-207ENST00000543125 968 ntTSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 PGA4-206ENST00000544899 867 ntTSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AC089984.2-201ENST00000550293 1201 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AC002375.1-201ENST00000551161 581 ntTSL 3 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AP006565.1-201ENST00000581117 586 ntTSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 RNF157-207ENST00000592271 755 ntTSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 SCGB2B3P-201ENST00000599388 409 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 STX8P1-201ENST00000603161 355 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AL080285.2-201ENST00000612765 458 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 AP003400.4-201ENST00000623832 399 ntBASIC9.64□□□□□ -0.87
LMO3Q8TAP4 POC5-203ENST00000446329 1728 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 LRRC4C-201ENST00000278198 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 ZBTB44-205ENST00000525842 9315 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 ELAVL4-201ENST00000357083 1442 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LMO3Q8TAP4 ZWILCH-201ENST00000307897 3960 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms