Protein–RNA interactions for Protein: Q9UBR1

UPB1, Beta-ureidopropionase, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPB1Q9UBR1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.5■□□□□ 0.55
UPB1Q9UBR1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.5■□□□□ 0.55
UPB1Q9UBR1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 AC092667.1-201ENST00000434301 2586 ntBASIC18.49■□□□□ 0.55
UPB1Q9UBR1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
UPB1Q9UBR1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 AC080038.1-201ENST00000611274 1154 ntBASIC18.48■□□□□ 0.55
UPB1Q9UBR1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
UPB1Q9UBR1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 AC138932.1-201ENST00000534164 6830 ntBASIC18.47■□□□□ 0.55
UPB1Q9UBR1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 LINC01521-201ENST00000504184 1943 ntBASIC18.47■□□□□ 0.55
UPB1Q9UBR1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPB1Q9UBR1 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 Z98882.1-201ENST00000622160 2253 ntBASIC18.46■□□□□ 0.55
UPB1Q9UBR1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 AC245052.3-201ENST00000450182 901 ntBASIC18.46■□□□□ 0.55
UPB1Q9UBR1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 MFSD11-216ENST00000590393 1141 ntBASIC18.46■□□□□ 0.55
UPB1Q9UBR1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPB1Q9UBR1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
UPB1Q9UBR1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPB1Q9UBR1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms