Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
HACD3Q9P035 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HACD3Q9P035 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HACD3Q9P035 AC011484.1-201ENST00000377652 1995 ntBASIC20.76■□□□□ 0.91
HACD3Q9P035 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HACD3Q9P035 AC011767.1-201ENST00000617410 1153 ntBASIC20.76■□□□□ 0.91
HACD3Q9P035 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HACD3Q9P035 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HACD3Q9P035 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HACD3Q9P035 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HACD3Q9P035 AC116050.2-201ENST00000612102 1779 ntBASIC20.75■□□□□ 0.91
HACD3Q9P035 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
HACD3Q9P035 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HACD3Q9P035 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HACD3Q9P035 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
HACD3Q9P035 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HACD3Q9P035 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HACD3Q9P035 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.75■□□□□ 0.91
HACD3Q9P035 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.75■□□□□ 0.91
HACD3Q9P035 AC007322.4-201ENST00000509611 723 ntBASIC20.75■□□□□ 0.91
HACD3Q9P035 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
HACD3Q9P035 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.75■□□□□ 0.91
HACD3Q9P035 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
HACD3Q9P035 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HACD3Q9P035 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HACD3Q9P035 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
HACD3Q9P035 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HACD3Q9P035 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HACD3Q9P035 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HACD3Q9P035 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
HACD3Q9P035 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
HACD3Q9P035 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HACD3Q9P035 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.75■□□□□ 0.91
HACD3Q9P035 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HACD3Q9P035 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
HACD3Q9P035 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.74■□□□□ 0.91
HACD3Q9P035 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HACD3Q9P035 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HACD3Q9P035 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HACD3Q9P035 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HACD3Q9P035 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.74■□□□□ 0.91
HACD3Q9P035 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
HACD3Q9P035 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HACD3Q9P035 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.74■□□□□ 0.91
HACD3Q9P035 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HACD3Q9P035 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HACD3Q9P035 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HACD3Q9P035 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HACD3Q9P035 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HACD3Q9P035 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HACD3Q9P035 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
HACD3Q9P035 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HACD3Q9P035 LINC01521-201ENST00000504184 1943 ntBASIC20.73■□□□□ 0.91
HACD3Q9P035 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HACD3Q9P035 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HACD3Q9P035 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HACD3Q9P035 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.73■□□□□ 0.91
HACD3Q9P035 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.73■□□□□ 0.91
HACD3Q9P035 CDV3P1-201ENST00000471403 739 ntBASIC20.73■□□□□ 0.91
HACD3Q9P035 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.73■□□□□ 0.91
HACD3Q9P035 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HACD3Q9P035 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HACD3Q9P035 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HACD3Q9P035 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HACD3Q9P035 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HACD3Q9P035 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
HACD3Q9P035 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.72■□□□□ 0.91
HACD3Q9P035 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
HACD3Q9P035 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
HACD3Q9P035 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HACD3Q9P035 DUX4L16-201ENST00000555130 1264 ntBASIC20.72■□□□□ 0.91
HACD3Q9P035 AL162412.1-201ENST00000567129 965 ntBASIC20.72■□□□□ 0.91
HACD3Q9P035 AL591742.1-201ENST00000604433 565 ntBASIC20.72■□□□□ 0.91
HACD3Q9P035 AL137784.2-201ENST00000607332 1000 ntBASIC20.72■□□□□ 0.91
HACD3Q9P035 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.72■□□□□ 0.91
HACD3Q9P035 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.72■□□□□ 0.91
HACD3Q9P035 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
HACD3Q9P035 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HACD3Q9P035 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HACD3Q9P035 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HACD3Q9P035 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HACD3Q9P035 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HACD3Q9P035 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.71■□□□□ 0.91
HACD3Q9P035 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HACD3Q9P035 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HACD3Q9P035 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HACD3Q9P035 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HACD3Q9P035 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.71■□□□□ 0.91
HACD3Q9P035 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.71■□□□□ 0.91
HACD3Q9P035 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.71■□□□□ 0.91
HACD3Q9P035 AC007322.3-201ENST00000426526 701 ntBASIC20.71■□□□□ 0.91
HACD3Q9P035 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.71■□□□□ 0.91
HACD3Q9P035 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.71■□□□□ 0.91
HACD3Q9P035 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.71■□□□□ 0.91
HACD3Q9P035 AC092437.1-201ENST00000624794 1048 ntBASIC20.71■□□□□ 0.91
HACD3Q9P035 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.71■□□□□ 0.91
HACD3Q9P035 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HACD3Q9P035 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HACD3Q9P035 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
HACD3Q9P035 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms