Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHRFAM7AQ494W8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 SLC29A4P1-201ENST00000398760 971 ntBASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 AC079140.4-201ENST00000507448 529 ntBASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHRFAM7AQ494W8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.46
CHRFAM7AQ494W8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHRFAM7AQ494W8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CHRFAM7AQ494W8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 TSPY6P-201ENST00000448518 926 ntBASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 AC231657.2-201ENST00000624556 255 ntBASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CHRFAM7AQ494W8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 AC093827.2-201ENST00000512654 315 ntBASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 AC068587.7-201ENST00000641602 218 ntBASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHRFAM7AQ494W8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRFAM7AQ494W8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRFAM7AQ494W8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRFAM7AQ494W8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRFAM7AQ494W8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHRFAM7AQ494W8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRFAM7AQ494W8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.87■□□□□ 0.45
CHRFAM7AQ494W8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.87■□□□□ 0.45
CHRFAM7AQ494W8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CHRFAM7AQ494W8 AC087239.1-201ENST00000622671 572 ntBASIC17.87■□□□□ 0.45
CHRFAM7AQ494W8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHRFAM7AQ494W8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms