Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.66■□□□□ 0.74
POLR2JP52435 PBX2P1-201ENST00000493219 1291 ntBASIC19.66■□□□□ 0.74
POLR2JP52435 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.66■□□□□ 0.74
POLR2JP52435 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
POLR2JP52435 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.66■□□□□ 0.74
POLR2JP52435 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.66■□□□□ 0.74
POLR2JP52435 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
POLR2JP52435 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.66■□□□□ 0.74
POLR2JP52435 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR2JP52435 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR2JP52435 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
POLR2JP52435 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.66■□□□□ 0.74
POLR2JP52435 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR2JP52435 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR2JP52435 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.65■□□□□ 0.74
POLR2JP52435 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
POLR2JP52435 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.65■□□□□ 0.74
POLR2JP52435 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.65■□□□□ 0.74
POLR2JP52435 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.65■□□□□ 0.74
POLR2JP52435 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR2JP52435 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR2JP52435 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.65■□□□□ 0.74
POLR2JP52435 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
POLR2JP52435 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
POLR2JP52435 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.64■□□□□ 0.73
POLR2JP52435 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 AC096631.2-201ENST00000436136 790 ntBASIC19.64■□□□□ 0.73
POLR2JP52435 AP001330.3-201ENST00000520123 633 ntBASIC19.64■□□□□ 0.73
POLR2JP52435 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.64■□□□□ 0.73
POLR2JP52435 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
POLR2JP52435 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 AC092720.2-201ENST00000602388 1665 ntBASIC19.64■□□□□ 0.73
POLR2JP52435 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.64■□□□□ 0.73
POLR2JP52435 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.64■□□□□ 0.73
POLR2JP52435 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.64■□□□□ 0.73
POLR2JP52435 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
POLR2JP52435 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR2JP52435 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
POLR2JP52435 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.63■□□□□ 0.73
POLR2JP52435 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.63■□□□□ 0.73
POLR2JP52435 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.63■□□□□ 0.73
POLR2JP52435 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR2JP52435 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2JP52435 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
POLR2JP52435 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2JP52435 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2JP52435 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.62■□□□□ 0.73
POLR2JP52435 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.62■□□□□ 0.73
POLR2JP52435 RASA4CP-201ENST00000424092 1398 ntBASIC19.62■□□□□ 0.73
POLR2JP52435 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2JP52435 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2JP52435 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
POLR2JP52435 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2JP52435 EDA-201ENST00000338901 1233 ntBASIC19.62■□□□□ 0.73
POLR2JP52435 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
POLR2JP52435 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.62■□□□□ 0.73
POLR2JP52435 AC012414.1-201ENST00000556676 535 ntBASIC19.62■□□□□ 0.73
POLR2JP52435 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.62■□□□□ 0.73
POLR2JP52435 AC106739.1-201ENST00000617035 715 ntBASIC19.62■□□□□ 0.73
POLR2JP52435 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
POLR2JP52435 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.62■□□□□ 0.73
POLR2JP52435 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.62■□□□□ 0.73
POLR2JP52435 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.62■□□□□ 0.73
POLR2JP52435 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.62■□□□□ 0.73
POLR2JP52435 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR2JP52435 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms