Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Sox6P40645 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox6P40645 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox6P40645 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox6P40645 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.85■□□□□ 0.29
Sox6P40645 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.85■□□□□ 0.29
Sox6P40645 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox6P40645 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox6P40645 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox6P40645 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox6P40645 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox6P40645 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sox6P40645 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox6P40645 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sox6P40645 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
Sox6P40645 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sox6P40645 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Sox6P40645 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.84■□□□□ 0.29
Sox6P40645 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.84■□□□□ 0.29
Sox6P40645 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Sox6P40645 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Sox6P40645 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sox6P40645 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox6P40645 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sox6P40645 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Sox6P40645 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sox6P40645 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
Sox6P40645 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sox6P40645 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.82■□□□□ 0.28
Sox6P40645 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC16.82■□□□□ 0.28
Sox6P40645 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sox6P40645 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
Sox6P40645 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Gm7514-201ENSMUST00000209475 934 ntBASIC16.82■□□□□ 0.28
Sox6P40645 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.82■□□□□ 0.28
Sox6P40645 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox6P40645 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.82■□□□□ 0.28
Sox6P40645 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox6P40645 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox6P40645 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox6P40645 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox6P40645 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox6P40645 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sox6P40645 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox6P40645 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox6P40645 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox6P40645 Gm26571-201ENSMUST00000181399 666 ntBASIC16.81■□□□□ 0.28
Sox6P40645 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC16.81■□□□□ 0.28
Sox6P40645 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sox6P40645 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sox6P40645 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox6P40645 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sox6P40645 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.8■□□□□ 0.28
Sox6P40645 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox6P40645 Gm10849-201ENSMUST00000100397 618 ntBASIC16.8■□□□□ 0.28
Sox6P40645 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox6P40645 Gm13534-201ENSMUST00000121169 513 ntBASIC16.8■□□□□ 0.28
Sox6P40645 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Sox6P40645 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sox6P40645 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.8■□□□□ 0.28
Sox6P40645 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sox6P40645 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms