Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.59■■□□□ 1.37
COL11A1P12107 PGM5P4-201ENST00000421970 445 ntBASIC23.59■■□□□ 1.37
COL11A1P12107 UBE2SP1-201ENST00000450587 669 ntBASIC23.59■■□□□ 1.37
COL11A1P12107 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A1P12107 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
COL11A1P12107 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC23.58■■□□□ 1.37
COL11A1P12107 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A1P12107 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.58■■□□□ 1.37
COL11A1P12107 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A1P12107 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A1P12107 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC23.58■■□□□ 1.37
COL11A1P12107 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
COL11A1P12107 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.58■■□□□ 1.37
COL11A1P12107 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC23.58■■□□□ 1.37
COL11A1P12107 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
COL11A1P12107 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
COL11A1P12107 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.57■■□□□ 1.36
COL11A1P12107 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A1P12107 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.57■■□□□ 1.36
COL11A1P12107 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A1P12107 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A1P12107 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.57■■□□□ 1.36
COL11A1P12107 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL11A1P12107 MFF-205ENST00000354503 1085 ntTSL 2 BASIC23.56■■□□□ 1.36
COL11A1P12107 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC23.56■■□□□ 1.36
COL11A1P12107 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.56■■□□□ 1.36
COL11A1P12107 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.56■■□□□ 1.36
COL11A1P12107 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A1P12107 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.56■■□□□ 1.36
COL11A1P12107 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A1P12107 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A1P12107 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A1P12107 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A1P12107 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.56■■□□□ 1.36
COL11A1P12107 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.56■■□□□ 1.36
COL11A1P12107 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A1P12107 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
COL11A1P12107 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
COL11A1P12107 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.56■■□□□ 1.36
COL11A1P12107 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
COL11A1P12107 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
COL11A1P12107 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.56■■□□□ 1.36
COL11A1P12107 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
COL11A1P12107 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.56■■□□□ 1.36
COL11A1P12107 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A1P12107 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL11A1P12107 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.56■■□□□ 1.36
COL11A1P12107 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A1P12107 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A1P12107 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A1P12107 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC23.55■■□□□ 1.36
COL11A1P12107 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A1P12107 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A1P12107 AC012618.2-201ENST00000428058 849 ntBASIC23.55■■□□□ 1.36
COL11A1P12107 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
COL11A1P12107 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.55■■□□□ 1.36
COL11A1P12107 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.55■■□□□ 1.36
COL11A1P12107 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.55■■□□□ 1.36
COL11A1P12107 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A1P12107 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
COL11A1P12107 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A1P12107 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL11A1P12107 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL11A1P12107 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.54■■□□□ 1.36
COL11A1P12107 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC23.54■■□□□ 1.36
COL11A1P12107 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC23.54■■□□□ 1.36
COL11A1P12107 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.54■■□□□ 1.36
COL11A1P12107 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.54■■□□□ 1.36
COL11A1P12107 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
COL11A1P12107 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL11A1P12107 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.54■■□□□ 1.36
COL11A1P12107 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC23.54■■□□□ 1.36
COL11A1P12107 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.54■■□□□ 1.36
COL11A1P12107 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
COL11A1P12107 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL11A1P12107 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL11A1P12107 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL11A1P12107 RPS2P4-201ENST00000476944 856 ntBASIC23.54■■□□□ 1.36
COL11A1P12107 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC23.54■■□□□ 1.36
COL11A1P12107 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL11A1P12107 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.54■■□□□ 1.36
COL11A1P12107 MIR2861-201ENST00000636310 90 ntBASIC23.54■■□□□ 1.36
COL11A1P12107 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.54■■□□□ 1.36
COL11A1P12107 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC23.53■■□□□ 1.36
COL11A1P12107 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A1P12107 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A1P12107 NXN-202ENST00000537628 1340 ntTSL 3 BASIC23.53■■□□□ 1.36
COL11A1P12107 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC23.53■■□□□ 1.36
COL11A1P12107 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL11A1P12107 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC23.52■■□□□ 1.36
COL11A1P12107 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.52■■□□□ 1.36
COL11A1P12107 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A1P12107 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC23.52■■□□□ 1.36
COL11A1P12107 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC23.52■■□□□ 1.36
COL11A1P12107 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC23.52■■□□□ 1.36
COL11A1P12107 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.52■■□□□ 1.36
COL11A1P12107 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A1P12107 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
COL11A1P12107 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL11A1P12107 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms