Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PDE4DIPP1-201ENST00000420737 1641 ntBASIC8.65□□□□□ -1.02
P04436 FTO-217ENST00000637001 1609 ntTSL 5 BASIC8.65□□□□□ -1.02
P04436 CAB39L-205ENST00000409308 2416 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 TRAPPC6B-202ENST00000347691 3229 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 AL021937.1-201ENST00000420171 1558 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 AP3B2-209ENST00000542200 3921 ntTSL 2 BASIC8.65□□□□□ -1.02
P04436 MFSD14B-202ENST00000428393 2275 ntTSL 5 BASIC8.65□□□□□ -1.02
P04436 PAPPA2-201ENST00000367661 4369 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 AC116913.1-201ENST00000565387 2168 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 RHOBTB1-202ENST00000357917 4339 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
P04436 RBMX-207ENST00000562646 2148 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 STRADA-230ENST00000638702 2140 ntTSL 5 BASIC8.65□□□□□ -1.02
P04436 AC015883.1-201ENST00000623054 2074 ntBASIC8.65□□□□□ -1.02
P04436 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
P04436 EBNA1BP2-201ENST00000236051 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 AC020604.1-201ENST00000622979 1909 ntBASIC8.65□□□□□ -1.02
P04436 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 RIPPLY1-201ENST00000276173 1172 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 GDF3-201ENST00000329913 1239 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 OR51I2-201ENST00000341449 1070 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
P04436 RN7SKP87-201ENST00000364096 301 ntBASIC8.65□□□□□ -1.02
P04436 MRPL55-216ENST00000366744 726 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
P04436 S100A4-203ENST00000368715 573 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
P04436 C10orf82-201ENST00000369210 994 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 UBE2C-205ENST00000372568 914 ntTSL 2 BASIC8.65□□□□□ -1.02
P04436 RPS6-202ENST00000380381 892 ntTSL 2 BASIC8.65□□□□□ -1.02
P04436 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 AL512430.3-201ENST00000405355 441 ntBASIC8.65□□□□□ -1.02
P04436 HNRNPA1P64-201ENST00000411674 922 ntBASIC8.65□□□□□ -1.02
P04436 LINC00111-201ENST00000413718 575 ntTSL 3 BASIC8.65□□□□□ -1.02
P04436 AL355310.1-201ENST00000436416 596 ntTSL 3 BASIC8.65□□□□□ -1.02
P04436 AC064862.2-201ENST00000445460 196 ntBASIC8.65□□□□□ -1.02
P04436 TRAF3IP2-AS1-206ENST00000449449 784 ntTSL 3 BASIC8.65□□□□□ -1.02
P04436 ASS1P12-201ENST00000452496 1227 ntBASIC8.65□□□□□ -1.02
P04436 DEFT1P2-201ENST00000453669 421 ntBASIC8.65□□□□□ -1.02
P04436 AC093627.5-201ENST00000462565 662 ntTSL 3 BASIC8.65□□□□□ -1.02
P04436 AC008770.1-204ENST00000489336 622 ntTSL 2 BASIC8.65□□□□□ -1.02
P04436 BAALC-AS1-202ENST00000500902 993 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 FAM197Y9-203ENST00000505707 345 ntBASIC8.65□□□□□ -1.02
P04436 LINC02509-201ENST00000508790 691 ntTSL 3 BASIC8.65□□□□□ -1.02
P04436 AC009901.2-201ENST00000521595 240 ntBASIC8.65□□□□□ -1.02
P04436 H2AFZP4-201ENST00000534148 377 ntBASIC8.65□□□□□ -1.02
P04436 COA4-206ENST00000545127 922 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
P04436 OR4K4P-201ENST00000556991 684 ntBASIC8.65□□□□□ -1.02
P04436 FRG2DP-201ENST00000564452 852 ntTSL 2 BASIC8.65□□□□□ -1.02
P04436 AC113189.3-201ENST00000576615 330 ntTSL 3 BASIC8.65□□□□□ -1.02
P04436 AC087164.1-201ENST00000577847 513 ntTSL 3 BASIC8.65□□□□□ -1.02
P04436 AP005265.1-201ENST00000584914 872 ntBASIC8.65□□□□□ -1.02
P04436 AC005329.2-202ENST00000589673 392 ntTSL 3 BASIC8.65□□□□□ -1.02
P04436 EAF1-AS1-205ENST00000595975 892 ntTSL 2 BASIC8.65□□□□□ -1.02
P04436 AC092723.1-201ENST00000599411 474 ntTSL 5 BASIC8.65□□□□□ -1.02
P04436 AC078802.1-201ENST00000602879 843 ntTSL 4 BASIC8.65□□□□□ -1.02
P04436 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 AC083798.2-203ENST00000608346 564 ntTSL 2 BASIC8.65□□□□□ -1.02
P04436 FAM197Y4-201ENST00000616275 467 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 SMIM2-202ENST00000617002 255 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
P04436 FAM197Y5-203ENST00000619815 467 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 AC097478.3-201ENST00000620420 872 ntBASIC8.65□□□□□ -1.02
P04436 ZNF860-201ENST00000360311 3098 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
P04436 AKR1C3-201ENST00000380554 1807 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
P04436 ABT1-201ENST00000274849 2949 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
P04436 ZSCAN25-202ENST00000334715 4079 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
P04436 TMEM196-201ENST00000405764 3975 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
P04436 SP100-201ENST00000264052 3882 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
P04436 RNF38-206ENST00000377885 4985 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
P04436 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC8.65□□□□□ -1.03
P04436 CFAP161-201ENST00000286732 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
P04436 CYTH4-201ENST00000248901 3206 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
P04436 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
P04436 DKK2-201ENST00000285311 3638 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
P04436 DAB2-217ENST00000545653 4537 ntTSL 5 BASIC8.64□□□□□ -1.03
P04436 SLC11A2-209ENST00000547198 2486 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 CHRNA1-202ENST00000348749 1984 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 KIAA1958-201ENST00000337530 11775 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 EYA4-208ENST00000452339 2411 ntTSL 2 BASIC8.64□□□□□ -1.03
P04436 FBXL2-216ENST00000484457 3847 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 PRAMEF30P-201ENST00000438176 1417 ntBASIC8.64□□□□□ -1.03
P04436 AC026877.1-201ENST00000476047 1411 ntBASIC8.64□□□□□ -1.03
P04436 DCAF1-201ENST00000335891 4114 ntTSL 5 BASIC8.64□□□□□ -1.03
P04436 DSG1-201ENST00000257192 5045 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 AC008764.10-201ENST00000625135 1830 ntBASIC8.64□□□□□ -1.03
P04436 SLC7A6-201ENST00000219343 6251 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 AGBL3-203ENST00000436302 3533 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
P04436 AC007038.1-201ENST00000452057 2199 ntTSL 2 BASIC8.64□□□□□ -1.03
P04436 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
P04436 DECR1-201ENST00000220764 1207 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 HIGD1B-201ENST00000253410 635 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 MT1B-201ENST00000334346 380 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 ZNF880-201ENST00000344085 496 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 WNT16-202ENST00000361301 1230 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 SNORA71C-201ENST00000364642 134 ntBASIC8.64□□□□□ -1.03
P04436 SNORA42.2-201ENST00000384771 134 ntBASIC8.64□□□□□ -1.03
P04436 SCMH1-209ENST00000397174 2977 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
P04436 WISP3-205ENST00000409166 953 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
P04436 FAM96AP2-201ENST00000414727 477 ntBASIC8.64□□□□□ -1.03
P04436 PMP22-204ENST00000426385 571 ntTSL 2 BASIC8.64□□□□□ -1.03
P04436 AL096701.1-201ENST00000445477 457 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms