Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm44699-201ENSMUST00000208229 5083 ntTSL 5 BASIC5.76□□□□□ -1.49
Col6a3E9PWQ3 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm29045-201ENSMUST00000187278 698 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm28564-201ENSMUST00000190864 240 ntTSL 5 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm18689-201ENSMUST00000203969 902 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 A230028O05Rik-201ENSMUST00000181655 2793 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Slc12a6-203ENSMUST00000110987 3722 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Rap2c-201ENSMUST00000053593 3545 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm12897-201ENSMUST00000120341 250 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm22211-201ENSMUST00000158097 156 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm39363-201ENSMUST00000214251 723 ntTSL 3 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Olfr923-204ENSMUST00000219798 1068 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm7093-201ENSMUST00000223004 581 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm29293-201ENSMUST00000189416 2188 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm11912-201ENSMUST00000117235 264 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm12520-201ENSMUST00000117493 316 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Oaz3-201ENSMUST00000191506 732 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
Col6a3E9PWQ3 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Limch1-202ENSMUST00000101164 5192 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm7269-201ENSMUST00000210819 1373 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm23608-201ENSMUST00000104545 128 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm44281-201ENSMUST00000203090 166 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm45700-201ENSMUST00000205866 347 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm6906-201ENSMUST00000218014 569 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 AC144772.2-201ENSMUST00000228830 2859 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm22395-201ENSMUST00000177427 96 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm4602-201ENSMUST00000203198 308 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm2961-201ENSMUST00000211074 772 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Col6a3E9PWQ3 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms