Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mrpl40Q9Z2Q5 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mrpl40Q9Z2Q5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mrpl40Q9Z2Q5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mrpl40Q9Z2Q5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mrpl40Q9Z2Q5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Mrpl40Q9Z2Q5 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Mrpl40Q9Z2Q5 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Mrpl40Q9Z2Q5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Gm2559-201ENSMUST00000201323 363 ntBASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Mrpl40Q9Z2Q5 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Mrpl40Q9Z2Q5 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.93■□□□□ 0.46
Mrpl40Q9Z2Q5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mrpl40Q9Z2Q5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mrpl40Q9Z2Q5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mrpl40Q9Z2Q5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Mrpl40Q9Z2Q5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.93■□□□□ 0.46
Mrpl40Q9Z2Q5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Mrpl40Q9Z2Q5 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Mrpl40Q9Z2Q5 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Mrpl40Q9Z2Q5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mrpl40Q9Z2Q5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mrpl40Q9Z2Q5 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mrpl40Q9Z2Q5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mrpl40Q9Z2Q5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Mrpl40Q9Z2Q5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mrpl40Q9Z2Q5 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mrpl40Q9Z2Q5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Mrpl40Q9Z2Q5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mrpl40Q9Z2Q5 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Mrpl40Q9Z2Q5 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Mrpl40Q9Z2Q5 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Mrpl40Q9Z2Q5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.91■□□□□ 0.46
Mrpl40Q9Z2Q5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mrpl40Q9Z2Q5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mrpl40Q9Z2Q5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Mrpl40Q9Z2Q5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mrpl40Q9Z2Q5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Mrpl40Q9Z2Q5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.91■□□□□ 0.46
Mrpl40Q9Z2Q5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms