Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PCDH15Q96QU1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH15Q96QU1 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.25■□□□□ 0.83
PCDH15Q96QU1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDH15Q96QU1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PCDH15Q96QU1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 AC239809.2-201ENST00000415381 517 ntBASIC20.23■□□□□ 0.83
PCDH15Q96QU1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 AC012306.2-201ENST00000609350 630 ntBASIC20.23■□□□□ 0.83
PCDH15Q96QU1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 AC092053.2-201ENST00000640557 1818 ntBASIC20.23■□□□□ 0.83
PCDH15Q96QU1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 KRT18P21-201ENST00000515767 1272 ntBASIC20.23■□□□□ 0.83
PCDH15Q96QU1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDH15Q96QU1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 AC087499.1-201ENST00000418141 1075 ntBASIC20.22■□□□□ 0.83
PCDH15Q96QU1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH15Q96QU1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms