Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AC091799.1-201ENST00000422823 811 ntBASIC21.31■■□□□ 1
PCDH19Q8TAB3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.31■■□□□ 1
PCDH19Q8TAB3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.31■■□□□ 1
PCDH19Q8TAB3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDH19Q8TAB3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDH19Q8TAB3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCDH19Q8TAB3 MYCNOS-205ENST00000641950 531 ntBASIC21.31■■□□□ 1
PCDH19Q8TAB3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.31■■□□□ 1
PCDH19Q8TAB3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PCDH19Q8TAB3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH19Q8TAB3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH19Q8TAB3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH19Q8TAB3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH19Q8TAB3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH19Q8TAB3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.3■■□□□ 1
PCDH19Q8TAB3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.3■■□□□ 1
PCDH19Q8TAB3 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.3■■□□□ 1
PCDH19Q8TAB3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.3■■□□□ 1
PCDH19Q8TAB3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.3■■□□□ 1
PCDH19Q8TAB3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCDH19Q8TAB3 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.3■■□□□ 1
PCDH19Q8TAB3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.3■■□□□ 1
PCDH19Q8TAB3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.3■■□□□ 1
PCDH19Q8TAB3 AC073314.1-201ENST00000568729 2216 ntBASIC21.3■■□□□ 1
PCDH19Q8TAB3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH19Q8TAB3 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.3■■□□□ 1
PCDH19Q8TAB3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.3■■□□□ 1
PCDH19Q8TAB3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PCDH19Q8TAB3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH19Q8TAB3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.29■■□□□ 1
PCDH19Q8TAB3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH19Q8TAB3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH19Q8TAB3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH19Q8TAB3 AC092667.1-201ENST00000434301 2586 ntBASIC21.29■■□□□ 1
PCDH19Q8TAB3 FP700111.2-201ENST00000619190 1892 ntBASIC21.29■■□□□ 1
PCDH19Q8TAB3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.29■■□□□ 1
PCDH19Q8TAB3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH19Q8TAB3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH19Q8TAB3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH19Q8TAB3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDH19Q8TAB3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.29■■□□□ 1
PCDH19Q8TAB3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.29■■□□□ 1
PCDH19Q8TAB3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.29■■□□□ 1
PCDH19Q8TAB3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.29■■□□□ 1
PCDH19Q8TAB3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH19Q8TAB3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDH19Q8TAB3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PCDH19Q8TAB3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDH19Q8TAB3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
PCDH19Q8TAB3 AC116050.2-201ENST00000612102 1779 ntBASIC21.28■■□□□ 1
PCDH19Q8TAB3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
PCDH19Q8TAB3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH19Q8TAB3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH19Q8TAB3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDH19Q8TAB3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH19Q8TAB3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH19Q8TAB3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDH19Q8TAB3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.28■■□□□ 1
PCDH19Q8TAB3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.28■■□□□ 1
PCDH19Q8TAB3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.28■■□□□ 1
PCDH19Q8TAB3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.28■■□□□ 1
PCDH19Q8TAB3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.28■■□□□ 1
PCDH19Q8TAB3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDH19Q8TAB3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDH19Q8TAB3 AP005212.1-201ENST00000581547 1997 ntBASIC21.28■■□□□ 1
PCDH19Q8TAB3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.28■■□□□ 1
PCDH19Q8TAB3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCDH19Q8TAB3 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDH19Q8TAB3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.27■■□□□ 1
PCDH19Q8TAB3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
PCDH19Q8TAB3 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.27■■□□□ 1
PCDH19Q8TAB3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDH19Q8TAB3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.27■■□□□ 1
PCDH19Q8TAB3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.27■■□□□ 1
PCDH19Q8TAB3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PCDH19Q8TAB3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.27■■□□□ 1
PCDH19Q8TAB3 AC027702.1-201ENST00000563810 1770 ntBASIC21.27■■□□□ 1
PCDH19Q8TAB3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PCDH19Q8TAB3 LINC01521-201ENST00000504184 1943 ntBASIC21.27■■□□□ 1
PCDH19Q8TAB3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH19Q8TAB3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDH19Q8TAB3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDH19Q8TAB3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PCDH19Q8TAB3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms