Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 ASI3YNL008C 2031 nt1.62□□□□□ -2.15
CUP9P41817 SRB4YER022W 2064 nt1.62□□□□□ -2.15
CUP9P41817 UBP16YPL072W 1500 nt1.61□□□□□ -2.15
CUP9P41817 SRD1YCR018C 666 nt1.61□□□□□ -2.15
CUP9P41817 SDC1YDR469W 528 nt1.61□□□□□ -2.15
CUP9P41817 YGL118CYGL118C 438 nt1.61□□□□□ -2.15
CUP9P41817 CKA1YIL035C 1119 nt1.61□□□□□ -2.15
CUP9P41817 YKR051WYKR051W 1257 nt1.61□□□□□ -2.15
CUP9P41817 ATG10YLL042C 504 nt1.61□□□□□ -2.15
CUP9P41817 ECI1YLR284C 843 nt1.61□□□□□ -2.15
CUP9P41817 IRC14YOR135C 342 nt1.61□□□□□ -2.15
CUP9P41817 COG3YER157W 2406 nt1.61□□□□□ -2.15
CUP9P41817 YMR045CYMR045C 5268 nt1.61□□□□□ -2.15
CUP9P41817 RRI1YDL216C 1323 nt1.61□□□□□ -2.15
CUP9P41817 GCN2YDR283C 4980 nt1.6□□□□□ -2.15
CUP9P41817 RPS17BYDR447C 411 nt1.6□□□□□ -2.15
CUP9P41817 GLC7YER133W 939 nt1.6□□□□□ -2.15
CUP9P41817 COG7YGL005C 840 nt1.6□□□□□ -2.15
CUP9P41817 YGR226CYGR226C 210 nt1.6□□□□□ -2.15
CUP9P41817 PPE1YHR075C 1203 nt1.6□□□□□ -2.15
CUP9P41817 YLR302CYLR302C 363 nt1.6□□□□□ -2.15
CUP9P41817 YNR034W-AYNR034W-A 297 nt1.6□□□□□ -2.15
CUP9P41817 TRM7YBR061C 933 nt1.6□□□□□ -2.15
CUP9P41817 BRE5YNR051C 1548 nt1.6□□□□□ -2.15
CUP9P41817 YEL043WYEL043W 2871 nt1.6□□□□□ -2.15
CUP9P41817 YJL049WYJL049W 1353 nt1.59□□□□□ -2.15
CUP9P41817 ARP5YNL059C 2268 nt1.59□□□□□ -2.15
CUP9P41817 YGL024WYGL024W 336 nt1.59□□□□□ -2.15
CUP9P41817 YLR224WYLR224W 1110 nt1.59□□□□□ -2.15
CUP9P41817 GSP1YLR293C 660 nt1.59□□□□□ -2.15
CUP9P41817 YMR075C-AYMR075C-A 366 nt1.59□□□□□ -2.15
CUP9P41817 TRM3YDL112W 4311 nt1.59□□□□□ -2.16
CUP9P41817 NUP192YJL039C 5052 nt1.59□□□□□ -2.16
CUP9P41817 GPI17YDR434W 1605 nt1.58□□□□□ -2.16
CUP9P41817 SFB2YNL049C 2631 nt1.58□□□□□ -2.16
CUP9P41817 UTP5YDR398W 1932 nt1.58□□□□□ -2.16
CUP9P41817 HSH155YMR288W 2916 nt1.58□□□□□ -2.16
CUP9P41817 YCR108CYCR108C 192 nt1.58□□□□□ -2.16
CUP9P41817 KEI1YDR367W 666 nt1.58□□□□□ -2.16
CUP9P41817 YPS5YGL259W 498 nt1.58□□□□□ -2.16
CUP9P41817 FAR3YMR052W 615 nt1.58□□□□□ -2.16
CUP9P41817 IST2YBR086C 2841 nt1.58□□□□□ -2.16
CUP9P41817 MSL5YLR116W 1431 nt1.57□□□□□ -2.16
CUP9P41817 DPP1YDR284C 870 nt1.57□□□□□ -2.16
CUP9P41817 YDR381C-AYDR381C-A 345 nt1.57□□□□□ -2.16
CUP9P41817 YEA4YEL004W 1029 nt1.57□□□□□ -2.16
CUP9P41817 LSM4YER112W 564 nt1.57□□□□□ -2.16
CUP9P41817 YER189WYER189W 369 nt1.57□□□□□ -2.16
CUP9P41817 YGL177WYGL177W 348 nt1.57□□□□□ -2.16
CUP9P41817 YOL118CYOL118C 309 nt1.57□□□□□ -2.16
CUP9P41817 ARR2YPR200C 393 nt1.57□□□□□ -2.16
CUP9P41817 CDC60YPL160W 3273 nt1.57□□□□□ -2.16
CUP9P41817 FUS2YMR232W 2034 nt1.57□□□□□ -2.16
CUP9P41817 PRP6YBR055C 2700 nt1.57□□□□□ -2.16
CUP9P41817 PLP1YDR183W 693 nt1.56□□□□□ -2.16
CUP9P41817 YER091C-AYER091C-A 222 nt1.56□□□□□ -2.16
CUP9P41817 GOS1YHL031C 672 nt1.56□□□□□ -2.16
CUP9P41817 YLR163W-AYLR163W-A 114 nt1.56□□□□□ -2.16
CUP9P41817 YKE2YLR200W 345 nt1.56□□□□□ -2.16
CUP9P41817 VTI1YMR197C 654 nt1.56□□□□□ -2.16
CUP9P41817 YNL234WYNL234W 1281 nt1.56□□□□□ -2.16
CUP9P41817 YBR277CYBR277C 402 nt1.56□□□□□ -2.16
CUP9P41817 YBR292CYBR292C 372 nt1.56□□□□□ -2.16
CUP9P41817 FIG2YCR089W 4830 nt1.56□□□□□ -2.16
CUP9P41817 BFR1YOR198C 1413 nt1.56□□□□□ -2.16
CUP9P41817 VPS16YPL045W 2397 nt1.56□□□□□ -2.16
CUP9P41817 YBP2YGL060W 1926 nt1.56□□□□□ -2.16
CUP9P41817 MYO4YAL029C 4416 nt1.56□□□□□ -2.16
CUP9P41817 FYV4YHR059W 393 nt1.55□□□□□ -2.16
CUP9P41817 PCL5YHR071W 690 nt1.55□□□□□ -2.16
CUP9P41817 TMA7YLR262C-A 195 nt1.55□□□□□ -2.16
CUP9P41817 CSI2YOL007C 1026 nt1.55□□□□□ -2.16
CUP9P41817 YPR145C-AYPR145C-A 237 nt1.55□□□□□ -2.16
CUP9P41817 LYS9YNR050C 1341 nt1.55□□□□□ -2.16
CUP9P41817 IRC20YLR247C 4671 nt1.55□□□□□ -2.16
CUP9P41817 IPT1YDR072C 1584 nt1.55□□□□□ -2.16
CUP9P41817 BI3Q0115 1554 nt1.55□□□□□ -2.16
CUP9P41817 LRE1YCL051W 1752 nt1.54□□□□□ -2.16
CUP9P41817 DFG16YOR030W 1860 nt1.54□□□□□ -2.16
CUP9P41817 CFT1YDR301W 4074 nt1.54□□□□□ -2.16
CUP9P41817 MAM1YER106W 909 nt1.54□□□□□ -2.16
CUP9P41817 YHL037CYHL037C 402 nt1.54□□□□□ -2.16
CUP9P41817 YHL048C-AYHL048C-A 135 nt1.54□□□□□ -2.16
CUP9P41817 YHR210CYHR210C 1026 nt1.54□□□□□ -2.16
CUP9P41817 YJL032WYJL032W 315 nt1.54□□□□□ -2.16
CUP9P41817 ESC2YDR363W 1371 nt1.54□□□□□ -2.16
CUP9P41817 YLR422WYLR422W 5799 nt1.54□□□□□ -2.16
CUP9P41817 BAS1YKR099W 2436 nt1.54□□□□□ -2.16
CUP9P41817 YPR089WYPR089W 2667 nt1.53□□□□□ -2.16
CUP9P41817 RAV2YDR202C 1056 nt1.53□□□□□ -2.16
CUP9P41817 YDR336WYDR336W 945 nt1.53□□□□□ -2.16
CUP9P41817 YER046W-AYER046W-A 330 nt1.53□□□□□ -2.16
CUP9P41817 COX13YGL191W 390 nt1.53□□□□□ -2.16
CUP9P41817 YIL058WYIL058W 285 nt1.53□□□□□ -2.16
CUP9P41817 PRK1YIL095W 2433 nt1.53□□□□□ -2.16
CUP9P41817 YIL166CYIL166C 1629 nt1.53□□□□□ -2.16
CUP9P41817 MGA2YIR033W 3342 nt1.53□□□□□ -2.16
CUP9P41817 YJL147CYJL147C 1149 nt1.53□□□□□ -2.16
CUP9P41817 YBR013CYBR013C 390 nt1.53□□□□□ -2.16
CUP9P41817 UTP21YLR409C 2820 nt1.53□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 28.7 ms