Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
PDE6BP35913 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PDE6BP35913 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC25.64■■□□□ 1.69
PDE6BP35913 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PDE6BP35913 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.63■■□□□ 1.69
PDE6BP35913 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PDE6BP35913 KRASP1-201ENST00000407852 552 ntBASIC25.63■■□□□ 1.69
PDE6BP35913 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PDE6BP35913 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC25.63■■□□□ 1.69
PDE6BP35913 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC25.63■■□□□ 1.69
PDE6BP35913 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC25.63■■□□□ 1.69
PDE6BP35913 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDE6BP35913 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
PDE6BP35913 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
PDE6BP35913 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.63■■□□□ 1.69
PDE6BP35913 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDE6BP35913 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PDE6BP35913 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.63■■□□□ 1.69
PDE6BP35913 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
PDE6BP35913 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PDE6BP35913 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDE6BP35913 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDE6BP35913 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDE6BP35913 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PDE6BP35913 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.62■■□□□ 1.69
PDE6BP35913 TSPY15P-201ENST00000457163 923 ntBASIC25.62■■□□□ 1.69
PDE6BP35913 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PDE6BP35913 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC25.62■■□□□ 1.69
PDE6BP35913 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC25.62■■□□□ 1.69
PDE6BP35913 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC25.62■■□□□ 1.69
PDE6BP35913 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDE6BP35913 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
PDE6BP35913 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.62■■□□□ 1.69
PDE6BP35913 BRWD1-AS2-201ENST00000603064 1028 ntBASIC25.62■■□□□ 1.69
PDE6BP35913 AC097493.4-201ENST00000641197 219 ntBASIC25.62■■□□□ 1.69
PDE6BP35913 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PDE6BP35913 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDE6BP35913 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDE6BP35913 AC087633.2-202ENST00000565166 1439 ntBASIC25.62■■□□□ 1.69
PDE6BP35913 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDE6BP35913 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDE6BP35913 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
PDE6BP35913 SERP1-205ENST00000487153 657 ntTSL 4 BASIC25.61■■□□□ 1.69
PDE6BP35913 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PDE6BP35913 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDE6BP35913 RARRES2P10-201ENST00000564312 460 ntBASIC25.61■■□□□ 1.69
PDE6BP35913 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
PDE6BP35913 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.61■■□□□ 1.69
PDE6BP35913 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC25.61■■□□□ 1.69
PDE6BP35913 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PDE6BP35913 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDE6BP35913 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDE6BP35913 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDE6BP35913 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.6■■□□□ 1.69
PDE6BP35913 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDE6BP35913 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.6■■□□□ 1.69
PDE6BP35913 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PDE6BP35913 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PDE6BP35913 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
PDE6BP35913 AC012306.2-201ENST00000609350 630 ntBASIC25.6■■□□□ 1.69
PDE6BP35913 SNX21-213ENST00000614929 587 ntTSL 5 BASIC25.6■■□□□ 1.69
PDE6BP35913 AC006557.6-201ENST00000623071 864 ntBASIC25.6■■□□□ 1.69
PDE6BP35913 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PDE6BP35913 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PDE6BP35913 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDE6BP35913 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PDE6BP35913 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.59■■□□□ 1.69
PDE6BP35913 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
PDE6BP35913 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDE6BP35913 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.59■■□□□ 1.69
PDE6BP35913 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDE6BP35913 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC25.59■■□□□ 1.69
PDE6BP35913 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PDE6BP35913 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC25.59■■□□□ 1.69
PDE6BP35913 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.59■■□□□ 1.69
PDE6BP35913 PRKY-204ENST00000533551 1019 ntBASIC25.59■■□□□ 1.69
PDE6BP35913 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC25.59■■□□□ 1.69
PDE6BP35913 TK2-213ENST00000563369 882 ntTSL 5 BASIC25.59■■□□□ 1.69
PDE6BP35913 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.59■■□□□ 1.69
PDE6BP35913 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC25.59■■□□□ 1.69
PDE6BP35913 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC25.59■■□□□ 1.69
PDE6BP35913 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
PDE6BP35913 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.58■■□□□ 1.69
PDE6BP35913 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDE6BP35913 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDE6BP35913 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC25.58■■□□□ 1.69
PDE6BP35913 AL355075.4-201ENST00000554988 638 ntBASIC25.58■■□□□ 1.69
PDE6BP35913 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC25.58■■□□□ 1.69
PDE6BP35913 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.58■■□□□ 1.69
PDE6BP35913 CABP2-204ENST00000636477 941 ntTSL 5 BASIC25.58■■□□□ 1.69
PDE6BP35913 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDE6BP35913 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC25.58■■□□□ 1.69
PDE6BP35913 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PDE6BP35913 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
PDE6BP35913 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.68
PDE6BP35913 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC25.57■■□□□ 1.68
PDE6BP35913 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDE6BP35913 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC25.57■■□□□ 1.68
PDE6BP35913 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
PDE6BP35913 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms